AT5G19750.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisomal membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT2G14860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:6677124..6679127 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 30370.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.90 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.20 | ||||||||||||||||||||||||||||||||
| Length | 288 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLNSITLTRK PPLPFNSVGF SGNHSSSFGR RTITEGSSSK ALSFGYKNVG SLKCGRSNWP GRSGTAFGHL VRVSAVPGGN SGGSGGLGGS GGGGGGSGGG 101: GGDGSDGKGK KWSLLSWYQA LLSNSPVLTK AVTAALLNLV GDLICQLTIN KTSSLDKKRT LTFTFLGLGL VGPTLHFWYL YLSKVVTASG LSGAVIRLLL 201: DQFVFAPIFV GVFLSAVVTL EGKPSNVIPK LQQEWTGAMI ANWQLWIPFQ FLNFRFVPQN YQVLASNVVA LAWNVILSFK AHKEVVAK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)