AT5G19290.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.954 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G14980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:+:6494113..6495105 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36664.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.79 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.03 | ||||||||||||||||||||||||||||||||||||
| Length | 330 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGLHPISDAN EHNPFGSLTA DEFYAKHSVS HSSAFITNPR GLKLFTQWWS PLPPTKPIGI IAVVHGFTGE SSWFLQLTSI LFAKSGFITC AIDHQGHGFS 101: DGLIAHIPDI NPVVDDCISF FDDFRSRQTP SDLPCFLYSE SLGGAIALYI SLRQRGVWDG LILNGAMCGI SDKFKPPWPL EHLLFVVANL IPTWRVIPTR 201: GSIPDVSFKE PWKRKLAMAS PRRTVAKPRA ATAYELIRVC KDLQGRFEEV EVPLLIVHGG GDVVCDVACV EELHRRAISE DKTIKIYPEL WHQMIGESEE 301: KVDLVYGDML SWLKSRAERK ARAAVDGGAA |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)