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AT5G19140.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.963
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:17644812 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Aluminium induced protein with YGL and LRDR motifs
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
AILP1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to aluminum ion; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHP6eggNOG:ENOG410YG6REMBL:AY039946EMBL:AY113899EMBL:CP002688EnsemblPlants:AT5G19140EnsemblPlants:AT5G19140.1
entrez:832034ExpressionAtlas:Q94BR2Gene3D:3.60.20.10GeneID:832034GO:GO:0005829GO:GO:0005886GO:GO:0006541
Gramene:AT5G19140.1hmmpanther:PTHR11772hmmpanther:PTHR11772:SF18HOGENOM:HOG000240407IntAct:Q94BR2InterPro:IPR024286InterPro:IPR029055
MEROPS:C44.A04OMA:DLLKGACPfam:PF12481PhylomeDB:Q94BR2Proteomes:UP000006548RefSeq:NP_197415.1SMART:SM01172
SMR:Q94BR2STRING:3702.AT5G19140.1SUPFAM:SSF56235TAIR:AT5G19140tair10-symbols:AILP1tair10-symbols:ATAILP1UniGene:At.22240
UniGene:At.26189UniProt:Q94BR2
Coordinates (TAIR10) chr5:+:6423398..6425785
Molecular Weight (calculated) 25016.60 Da
IEP (calculated) 6.11
GRAVY (calculated) -0.02
Length 234 amino acids
Sequence (TAIR10)
(BLAST)
001: MLGIFSGAIV SPPEELVAAG SRTPSPKTTG STLVNRFVEK NPSAVSVQVG DYVQLAYSHH NESPLRPRSF GAKDEIFCLF QGSLDNLGSL KQQYGLAKNA
101: NEVLLVIEAY KTLRDRAPYP ANHVVAHLSG DFAFVVFDKS TSTLFVASDQ VGKVPLYWGI TADGYVAFAD DVDLLKGACG KSLASFPQGC YYSTALGGLR
201: SFENPKNKIT AVPANEGEIW GATFKVEGAT VLAD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)