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AT5G18850.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.635
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J39XeggNOG:ENOG4111BH1EMBL:BT012126EMBL:BT012379
EMBL:CP002688EnsemblPlants:AT5G18850EnsemblPlants:AT5G18850.1entrez:832003
GeneID:832003GO:GO:0016021Gramene:AT5G18850.1IntAct:Q6NLF5
KEGG:ath:AT5G18850OMA:WKISATIPhylomeDB:Q6NLF5Proteomes:UP000006548
RefSeq:NP_197386.1TAIR:AT5G18850TMHMM:TMhelixUniGene:At.31371
UniProt:Q6NLF5
Coordinates (TAIR10) chr5:+:6286896..6287272
Molecular Weight (calculated) 11296.50 Da
IEP (calculated) 10.62
GRAVY (calculated) -0.25
Length 99 amino acids
Sequence (TAIR10)
(BLAST)
1: MASPSSSPTT RIWFRTVILI ALMVVLFYVG RPLYWKISAT IHDIRHNKQS VREGISQIVH EAQRSVGWYH DESDSGFREG HNKKSGIAVS RRLLFAGDQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)