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AT5G18630.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G18630-MONOMEReggNOG:ENOG410IQ3AeggNOG:ENOG4111VS9EMBL:BT015039EMBL:CP002688EnsemblPlants:AT5G18630EnsemblPlants:AT5G18630.1
entrez:831981ESTHER:arath-at5g18630ExpressionAtlas:Q6DBI3Gene3D:3.40.50.1820GeneID:831981GO:GO:0006629GO:GO:0016787
Gramene:AT5G18630.1gramene_pathway:3.1.1.3gramene_pathway:LIPAS-PWYhmmpanther:PTHR21493hmmpanther:PTHR21493:SF106HOGENOM:HOG000030073InterPro:IPR002921
InterPro:IPR029058OMA:DCSRSVLPfam:PF01764PhylomeDB:Q6DBI3Proteomes:UP000006548RefSeq:NP_850848.2SMR:Q6DBI3
STRING:3702.AT5G18630.1SUPFAM:SSF53474TAIR:AT5G18630UniGene:At.20654UniProt:Q6DBI3
Coordinates (TAIR10) chr5:+:6202965..6205448
Molecular Weight (calculated) 40675.50 Da
IEP (calculated) 6.98
GRAVY (calculated) -0.15
Length 358 amino acids
Sequence (TAIR10)
(BLAST)
001: MGQKRLLFLL AVFTFLVSSS YGRGVLKLKS DDDRPVYNHT LAVTLVEYAS AVYESDLTKL FTWTCERCNG LTKDFEVIEV IFDVEHCLQA YVGVAKDLNA
101: IIIAFRGTQE HSIQNWVSDL FWKQLDLNYP DMPDAMVHHG FYSAYHNTTL RPAVLDAITR VKKVYGANIN IIVTGHSMGG AMASFCGLDL VVNEGEENVQ
201: VMTFGQPRVG NAAFASYYSL LVPNTFRITH DRDMVPHLPP YYYHFPQKTY HHFPTEVWVK DFSFSNFVLF GLEKVCDNTG EDPTCSRSVR GNSISDHLRY
301: FGVELKCESW RQCSIVMNQD MERYSRKDSR GNLFLSRTVP PKDVVKTSSL SKTGISSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)