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AT5G18580.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.947
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : tonneau 2 (TON2)
Curator
Summary (TAIR10)
fass mutants have aberrant cell shapes due to defects in arrangement of cortical microtubules. Encodes a protein highly conserved in higher plants and similar in its C-terminal part to B' regulatory subunits of type 2A protein phosphatases. Interacts with an Arabidopsis type A subunit of PP2A in the yeast two-hybrid system.
Computational
Description (TAIR10)
FASS 1 (FASS); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28850.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:17252eggNOG:ENOG410XRBKeggNOG:KOG2562EMBL:AC069328EMBL:AF280057EMBL:AF290025EMBL:AF360316
EMBL:AY113888EMBL:CP002688EnsemblPlants:AT5G18580EnsemblPlants:AT5G18580.1entrez:831976Gene3D:1.10.238.10GeneID:831976
Genevisible:Q9FEE2GO:GO:0000226GO:GO:0000913GO:GO:0005509GO:GO:0005634GO:GO:0005737GO:GO:0005819
GO:GO:0009524GO:GO:0009826GO:GO:0030359GO:GO:0030865GO:GO:0050790Gramene:AT5G18580.1hmmpanther:PTHR12085
HOGENOM:HOG000005699IntAct:Q9FEE2InterPro:IPR002048InterPro:IPR011992InterPro:IPR018247KEGG:ath:AT5G18580KO:K11583
ncoils:CoilOMA:EPVSFQDPaxDb:Q9FEE2Pfam:PF13499Pfam:Q9FEE2Pfscan:PS50222PhylomeDB:Q9FEE2
PRIDE:Q9FEE2PRO:PR:Q9FEE2PROSITE:PS00018PROSITE:PS50222ProteinModelPortal:Q9FEE2Proteomes:UP000006548RefSeq:NP_568364.1
scanprosite:PS00018SMR:Q9FEE2STRING:3702.AT5G18580.1SUPFAM:SSF47473TAIR:AT5G18580tair10-symbols:EMB40tair10-symbols:FASS
tair10-symbols:FASS 2tair10-symbols:FS1tair10-symbols:GDOtair10-symbols:TON2UniGene:At.49037UniGene:At.66657UniProt:Q9FEE2
Coordinates (TAIR10) chr5:+:6175154..6178214
Molecular Weight (calculated) 55072.50 Da
IEP (calculated) 4.61
GRAVY (calculated) -0.44
Length 480 amino acids
Sequence (TAIR10)
(BLAST)
001: MYSGSSDGES HDTSTQRKIP PASSMLWVRN LRRYIGSGAG LGSEALMELE TKRILLEIFK EKQQKSQEAG TIPSFYKKKP EEGSISQRVQ KLAKYRFLKK
101: QSDLLLNADD LAAMWVCLRE NCVIDDATGA EKMNYEDFCH IASVCTEQIG PKCRRFFSPS NFMKFEKDEA GRIAILPFYL YVMRTVSLTQ ARIDMSELDE
201: DSDGFLHSDE MESYIGGLIP NLAQLRDMPP AFNQMYCRIA SQKFFFFCDP HRRGRACIKK ILLSNCLQEL MELHQESEEE VTDTEQAENW FSLTSAQRIC
301: DMFLALDKDM SGSLCKQELK EYADGTLTEI FIERVFDEHV RRGKIVAGNS REMDFDSFLD FVLALENKDT PEGLTYLFRC LDLQGRGFLT TADIHSLFRD
401: VHQKWIEGGN YELCIEDVRD EIWDMVKPSD PLKITLGDLL GCKQGGTVAS MLIDVRGFWA HDNRENLLQE EEEPPEEESQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)