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AT5G18150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Methyltransferase-related protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Methyltransferase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14602.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2CVeggNOG:ENOG410YUR2EMBL:AB012246EMBL:AK118794EMBL:BT005647EMBL:CP002688EnsemblPlants:AT5G18150
EnsemblPlants:AT5G18150.1entrez:831933GeneID:831933GO:GO:0008168Gramene:AT5G18150.1hmmpanther:PTHR34132hmmpanther:PTHR34132:SF1
HOGENOM:HOG000243620IntAct:Q9FK55KEGG:ath:AT5G18150OMA:CPMRFLLPhylomeDB:Q9FK55Proteomes:UP000006548RefSeq:NP_197316.1
STRING:3702.AT5G18150.1TAIR:AT5G18150UniGene:At.43144UniProt:Q9FK55
Coordinates (TAIR10) chr5:-:6000014..6000331
Molecular Weight (calculated) 9034.93 Da
IEP (calculated) 8.48
GRAVY (calculated) -0.38
Length 76 amino acids
Sequence (TAIR10)
(BLAST)
1: MCPMRFLLVF FSAVLAGYFA WKTVSSSPEF DSPDELNEKQ ELNLKKKMEN GFWVFVDMAS GRYLWRNLKE MREKSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)