AT5G17780.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G17720.1); Has 7857 Blast hits to 7854 proteins in 1332 species: Archae - 48; Bacteria - 4836; Metazoa - 288; Fungi - 267; Plants - 239; Viruses - 3; Other Eukaryotes - 2176 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:5867429..5868976 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 47458.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.44 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||
| Length | 417 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSFPRKFGTA IHAALSFIVF FFLDLLDAIL CVVYEFVDEI LEENSTGCYC TAAAPQSQTT DENELSSETL FGRRNIFRGM WFLGFAREFK SKLSRKLRKS 101: KIHQESVNRW SDCGCKSCKS WTKNEDGNLH VVVKDSTSRE YSVQEPSENV IFIHGFMGSS HFWTETVFEH IQKDDYRLLA IDLLGFGESP KPRDSLYTLK 201: DHVDTIERSV IKPYQLDSFH VVAHSMGCLI ALALAAKHSN IVKSVTLVAP PYFPSSVEGS VLNRIARKRL WPPLAFGTAV MSWYEHIGRC VCFIICKHHK 301: IWEWLIKLCI GKREIHWKIK DITRHTHHSA WHSMHNVICG GSKVADEHLE TLIKSGVKIH LMQGDCDQIV PSHCSGNMKR TFPAVEVDII TGADHDSMIS 401: GRGEEFAEKL ESIWCSC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)