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AT5G17760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G17740.1); Has 22170 Blast hits to 20463 proteins in 2871 species: Archae - 1329; Bacteria - 7564; Metazoa - 3216; Fungi - 2801; Plants - 2591; Viruses - 35; Other Eukaryotes - 4634 (source: NCBI BLink).
Protein Annotations
EC:3.6.1.3eggNOG:COG0465eggNOG:KOG0743EMBL:AB006706EMBL:CP002688EnsemblPlants:AT5G17760EnsemblPlants:AT5G17760.1
EnsemblPlants:AT5G17760.2entrez:831644ExpressionAtlas:Q9FN75Gene3D:3.40.50.300GeneID:831644Genevisible:Q9FN75GO:GO:0005524
GO:GO:0005886GO:GO:0016021GO:GO:0016887hmmpanther:PTHR23070hmmpanther:PTHR23070:SF35HOGENOM:HOG000237995InterPro:IPR003593
InterPro:IPR003959InterPro:IPR003960InterPro:IPR025753InterPro:IPR027417iPTMnet:Q9FN75KEGG:ath:AT5G17760OMA:PFFGEIE
PaxDb:Q9FN75Pfam:PF00004Pfam:PF14363PhylomeDB:Q9FN75PROSITE:PS00674ProteinModelPortal:Q9FN75Proteomes:UP000006548
RefSeq:NP_568357.1RefSeq:NP_850841.1scanprosite:PS00674SMART:SM00382SMR:Q9FN75STRING:3702.AT5G17760.1SUPFAM:SSF52540
TAIR:AT5G17760UniGene:At.23914UniProt:Q9FN75
Coordinates (TAIR10) chr5:-:5860591..5862301
Molecular Weight (calculated) 57462.30 Da
IEP (calculated) 7.34
GRAVY (calculated) -0.42
Length 505 amino acids
Sequence (TAIR10)
(BLAST)
001: MFFSKDLPSP TSVFTAYASM AGYMMMIRSM AHELIPAPLQ DFIYRTLRSL FFRSSSSTLT LTIDDDNMGM NNEIYRAAQT YLSTKISPDA VRLRISKGHK
101: DKHVNLYLSD GEIVNDVYED VQLVWRFVTD GGDKKGGGGG VGGRGGGGGR RGGMDDDGKS EYFELSFDKK HKDLILNSYV PYIESKAKEI RDERRILMLH
201: SLNSLRWESV ILEHPSTFET MAMEDDLKRD VIEDLDRFIR RKEFYKRVGK AWKRGYLLYG PPGTGKSSLV AAMANYLKFD VYDLQLASVM RDSDLRRLLL
301: ATRNRSILVI EDIDCAVDLP NRIEQPVEGK NRGESQGPLT LSGLLNFIDG LWSSCGDERI IIFTTNHKDR LDPALLRPGR MDMHIYMGHC SFQGFKTLAS
401: NYLGLSDAAM PHRLFPEIER LIDGEVMTPA QVAEELMKSE DADVALEGLV NVLEKMRLKS KESNPVMMKQ KESRLEMEEM RLKSDTEGSP RKNSKRFKKL
501: VLFWT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)