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AT5G17650.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycine/proline-rich protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glycine/proline-rich protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JTQKeggNOG:ENOG41107MREMBL:AL391151EMBL:BT012163EMBL:CP002688EnsemblPlants:AT5G17650EnsemblPlants:AT5G17650.1
entrez:831631GeneID:831631Gramene:AT5G17650.1hmmpanther:PTHR31248hmmpanther:PTHR31248:SF3KEGG:ath:AT5G17650OMA:NQSAYPS
PIR:T51469Proteomes:UP000006548RefSeq:NP_197267.1TAIR:AT5G17650UniGene:At.43059UniProt:Q9LF59
Coordinates (TAIR10) chr5:-:5817000..5817763
Molecular Weight (calculated) 18536.50 Da
IEP (calculated) 10.14
GRAVY (calculated) -1.05
Length 173 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNDQHNHSD RGFFHNLAGF AGGQYPPHGH GYGHHGHGYG SSYPYPPPPP PHGYPPVAYP PHGGYPPAGY PPAGYPPAGY PAHGYPSHGY PRPSHSGHHH
101: GGIGAIIAGG VAAAAGAHHM SHHHGHYGHH HGHGYGYGYH GHGKFKHGKF KHGKFGKHGM FGKHKGKFFK KWK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)