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AT5G17630.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Nucleotide/sugar transporter family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Nucleotide/sugar transporter family protein; FUNCTIONS IN: antiporter activity, glucose transmembrane transporter activity; INVOLVED IN: hexose phosphate transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:16905eggNOG:ENOG410XP1SeggNOG:KOG1441EMBL:AF209211EMBL:AF372964EMBL:AL391151EMBL:BT000586
EMBL:CP002688EnsemblPlants:AT5G17630EnsemblPlants:AT5G17630.1entrez:831629GeneID:831629Genevisible:Q9LF61GO:GO:0009536
GO:GO:0009941GO:GO:0015120GO:GO:0015713GO:GO:0016021GO:GO:0031969GO:GO:0035436GO:GO:0071917
Gramene:AT5G17630.1hmmpanther:PTHR11132hmmpanther:PTHR11132:SF88HOGENOM:HOG000241297InParanoid:Q9LF61IntAct:Q9LF61InterPro:IPR004696
InterPro:IPR004853KEGG:ath:AT5G17630KO:K15283OMA:IVFNIFNPaxDb:Q9LF61Pfam:PF03151Pfam:Q9LF61
PhylomeDB:Q9LF61PIR:T51467PRIDE:Q9LF61PRO:PR:Q9LF61ProteinModelPortal:Q9LF61Proteomes:UP000006548RefSeq:NP_197265.1
STRING:3702.AT5G17630.1SUPFAM:0043518TAIR:AT5G17630TCDB:2.A.7.9.22TIGRfam:TIGR00817TIGRFAMs:TIGR00817TMHMM:TMhelix
UniGene:At.49033UniGene:At.70135UniProt:Q9LF61
Coordinates (TAIR10) chr5:+:5809475..5810728
Molecular Weight (calculated) 45772.20 Da
IEP (calculated) 10.22
GRAVY (calculated) 0.34
Length 417 amino acids
Sequence (TAIR10)
(BLAST)
001: MISLNLSPSL NPGLLHKTRT CQQPTRLSAL LVTNPKPFNH RHPLGLSPIP NLQIRDVSAK PLLSLTNPES SSGFSRKPRS IAAVGSSDSN PDEKSDLGEA
101: EKKEKKAKTL QLGIVFGLWY FQNIVFNIFN KKALNVFPYP WLLASFQLFA GSIWMLVLWS FKLYPCPKIS KPFIIALLGP ALFHTIGHIS ACVSFSKVAV
201: SFTHVIKSAE PVFSVIFSSL LGDSYPLAVW LSILPIVMGC SLAAVTEVSF NLGGLSGAMI SNVGFVLRNI YSKRSLQSFK EIDGLNLYGC ISILSLLYLF
301: PVAIFVEGSH WVPGYHKAIA SVGTPSTFYF WVLLSGVFYH LYNQSSYQAL DEISPLTFSV GNTMKRVVVI ISTVLVFRNP VRPLNALGSA IAIFGTFLYS
401: QATAKKKKIE VGGDKKN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)