AT5G17530.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phosphoglucosamine mutase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
phosphoglucosamine mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: phosphoglucomutase, putative / glucose phosphomutase, putative (TAIR:AT1G70820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:5778168..5781863 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 62878.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.21 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 581 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSTLLPCPRE KMAFNLNSSM RAHTLSKYQF VLSKQRTFYC NATSSSATVP SLDKNDFLKL QNGSDIRGVA VTGVEGEPVS LPEPVTEAIA AAFGQWLLHK 101: KKAESRRLRV SVGHDSRISA QTLLEAVSRG LGVSGLDVVQ FGLASTPAMF NSTLTEDESF LCPADGAIMI TASHLPYNRN GFKFFTSDGG LGKVDIKNIL 201: ERAADIYKKL SDENLRKSQR ESSSITKVDY MSVYTSGLVK AVRKAAGDLE KPLEGFHIVV DAGNGAGGFF AAKVLEPLGA ITSGSQFLEP DGMFPNHIPN 301: PEDKAAMEAI TKAVLDNKAD LGIIFDTDVD RSAAVDSSGR EFNRNRLIAL LSAIVLEEHP GTTIVTDSVT SDGLTSFIEK KLGGKHHRFK RGYKNVIDEA 401: IRLNSVGEES HLAIETSGHG ALKENHWLDD GAYLMVKILN KLAAARAAGQ GSGSKVLTDL VEGLEEPKVA LELRLKIDKN HPDLEGSDFR EYGEKVLQHV 501: SNSIETNPNL IIAPVNYEGI RVSGFGGWFL LRLSLHDPVL PLNIEAQSED DAVKLGLVVA TTVKEFNALD TCALSNLTHS S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)