AT5G17520.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : root cap 1 (RCP1) | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ROOT CAP 1 (RCP1); FUNCTIONS IN: maltose transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17523.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:5772796..5775231 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45282.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.67 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.41 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 415 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEGKAIATSL GGDRVLIFPC SPRSSFVFTS RLSSLPLKRA SIGGAVSCSG VNGLTRWNSI VSTRRLVPVR SINSESDSDS DFPHENQQGN PGLGKFKEYQ 101: EWDSWTAKFS GGANIPFLML QLPQIILNTQ NLLAGNNTAL SAVPWLGMLT GLLGNLSLLS YFAKKREKEA AVVQTLGVVS THIVLAQLTM AEAMPIQYFV 201: ATSAVVTIGL IVNCLYYFGK LSKTVWQLWE DVITIGGLSV LPQIMWSTFV PLVPNSILPG TTAFGIAVAA IIMARTGKLS EKGVRFVGSL SGWTATLMFM 301: WMPVSQMWTN FLNPDNIKGL SSITMLLSMM GNGLMIPRAL FIRDLMWLTG SLWATLFYGY GNILCLYLVN CTSQSFFVAA TIGLISWIGL ALWRDAVAYG 401: HNSPFRSLKE LVFGP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)