AT5G16810.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); Has 87 Blast hits to 87 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 19; Plants - 57; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:5526860..5529878 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46507.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.90 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||
| Length | 418 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNLVAIHRVS FECVSRFSLK HRESGDGFSG CRIVNSRGRN RPIRRLHAVT ASLITSADSF EVGRLIGSYG FMNVTSYTGL QSGSDFEYTS DDIGRLKSQD 101: IGEGAVKIRL YQGRISQGPF RGTPVVFKVY PGQRAGGVEA DMMAANELNA HSFLQSKSLP ANLLLLVGGF ETQLGEQWLA FRDGGKDSAA DYAQTASEKT 201: TRARSQGVWN PYEKEQMIKR RRNFVIKILQ GAMKGLAFMH DNDRLHQSLG PSSIVLNTPA EREAIYLIPR LRDLAFSVDI RPSCLEEGAT SGSLSEQLWR 301: RANAAGAYTV FEKRAFGIAD DIYEAGLLFA YLAFVPFCEA GVTDSLSLQR LLENTFRLDI EAVREYCLAD ERLEEAVKFL DLGDRAGWEL LQAMLNADYR 401: KRPMAEAVLS HRFLNGVV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)