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AT5G16800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.893
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Acyl-CoA N-acyltransferases (NAT) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: MEIOTIC CONTROL OF CROSSOVERS1 (TAIR:AT3G02980.1); Has 1133 Blast hits to 1133 proteins in 406 species: Archae - 80; Bacteria - 421; Metazoa - 264; Fungi - 72; Plants - 125; Viruses - 2; Other Eukaryotes - 169 (source: NCBI BLink).
Protein Annotations
EMBL:CP002688EnsemblPlants:AT5G16800EnsemblPlants:AT5G16800.1entrez:831543
ExpressionAtlas:F4KFH9Gene3D:3.40.630.30GeneID:831543GO:GO:0008080
Gramene:AT5G16800.1hmmpanther:PTHR14744hmmpanther:PTHR14744:SF15InterPro:IPR000182
InterPro:IPR016181OMA:NIHLALFPfam:PF00583Pfscan:PS51186
PhylomeDB:F4KFH9PRIDE:F4KFH9PROSITE:PS51186ProteinModelPortal:F4KFH9
Proteomes:UP000006548RefSeq:NP_197182.2SMR:F4KFH9SUPFAM:SSF55729
TAIR:AT5G16800UniGene:At.9935UniProt:F4KFH9
Coordinates (TAIR10) chr5:-:5524720..5526295
Molecular Weight (calculated) 27196.90 Da
IEP (calculated) 9.17
GRAVY (calculated) -0.12
Length 236 amino acids
Sequence (TAIR10)
(BLAST)
001: MSRFPRGFVE NSSMEEPKIA RRPTICFRPI NPSDLERLEQ IHRDIFPIRY ESEFFQNVVN GGDIVSWAAV DRSRPDGHSE ELIGFVTAKI VLAKESEISD
101: LIRYDSSKGE GTLVYILTLG VVETYRKRGI AKALINEVVK YSSGIPVCRG VYLHVIAHNN PAIRLYKRMS FRCVRRLHGF YLINGQHFDS YLFVYFINGS
201: RSPCSPLYVQ NTSIFCILNS VCCDVSLRFL HRWGYR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)