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AT5G16690.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : origin recognition complex subunit 3
Curator
Summary (TAIR10)
Origin Recognition Complex subunit 3. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.
Computational
Description (TAIR10)
origin recognition complex subunit 3 (ORC3); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 3, N-terminal (InterPro:IPR010748), Origin recognition complex, subunit 3 (InterPro:IPR020795); Has 319 Blast hits to 284 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 89; Plants - 45; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XT1WeggNOG:KOG2538EMBL:AL391147EMBL:AY524002
EMBL:CP002688EnsemblPlants:AT5G16690EnsemblPlants:AT5G16690.1entrez:831530
GeneID:831530Genevisible:Q6E7H0GO:GO:0000808GO:GO:0003677
GO:GO:0005664GO:GO:0006260Gramene:AT5G16690.1hmmpanther:PTHR12748
hmmpanther:PTHR12748:SF0HOGENOM:HOG000119238InParanoid:Q6E7H0IntAct:Q6E7H0
InterPro:IPR020795iPTMnet:Q6E7H0KEGG:ath:AT5G16690KO:K02605
MINT:MINT-7304136ncoils:CoilOMA:RLEPCKLPANTHER:PTHR12748
PaxDb:Q6E7H0Pfam:PF07034Pfam:Q6E7H0PhylomeDB:Q6E7H0
PIR:T51501PRIDE:Q6E7H0PRO:PR:Q6E7H0ProteinModelPortal:Q6E7H0
Proteomes:UP000006548Reactome:R-ATH-68616Reactome:R-ATH-68689Reactome:R-ATH-68867
Reactome:R-ATH-68949Reactome:R-ATH-68962Reactome:R-ATH-69298RefSeq:NP_197171.2
SMR:Q6E7H0STRING:3702.AT5G16690.1TAIR:AT5G16690tair10-symbols:ATORC3
tair10-symbols:ORC3UniGene:At.50462UniProt:Q6E7H0
Coordinates (TAIR10) chr5:+:5474410..5479878
Molecular Weight (calculated) 82759.30 Da
IEP (calculated) 8.36
GRAVY (calculated) -0.18
Length 734 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPSGTVADP PQCSTTDSFN SSDTAENDIR PFFVLHKASS GNHNGKLTGI VKSKRRIESP SPKIAKRSEV ESVEEEDGQF FSTLRFKVFE TVWSKIEKTI
101: EDVLRNSNSK VFSGIHDWIR ESFESIISSG ALKLSEAVRS YPVLTQASSK QLLTAMVLTR NLEMVDDLLT FEELELHLKS QGCHVAKLSS MDFSAKSGVG
201: GCLRGLLRQF VMPTVDVADV TILASWYREN KNHENPVVII VDDTERCCGP VLSDLILILS EWAIKVPIFL IMGVSTAHDA PRKILSVNAL QRLCATRFTL
301: SSPAERMDAV LKAVFLKPCS GFTVSHKVAL FMRSYFLCQD GTLTSFVRTL KIACLQHFSL EPLSIMLEHF CHDGVNQLSG EGTELLTEAT MKHAFDLPSV
401: TRNKITRSTF EMLPHFLLDL QRMPNPWSIV VLCLYEAGKF DKLRLLDIFC EILDPEARYL KYFSPSEIVN SQSHNSGRNN VIRRVLRKLR DLSPSQLSSM
501: LKSWENLTAE FTEINDKVIE LHPFMRAVEA AGQRQGLPNS PKKHASRSNS KLEKELKAMT DKVATVIEFM LREYMKPVES VPFHEILCFK NVDKLQSALL
601: GDPRGRIQLD LLESHDILHC VCCSQRGTTL LPSMHDTSIL YKLAQEHADV INLHDWYQSF KTILIPRSSK AKQKSKSSSK SKKRKEICEE PEAPAEALIQ
701: ARFCRAVMEL QITGLIRMPS KRRPDFVQRV AFGS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)