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AT5G16590.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
AmiGO : plasma membrane 17397506
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 14506206
TAIR : plasma membrane 17397506
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27122571 (2016): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:23990937 (2013): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:21109274 (2011): extracellular region
  • PMID:20843791 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16635983 (2006): plasma membrane
  • PMID:16287169 (2006): extracellular region
  • PMID:15308754 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to symbiotic fungus; LOCATED IN: plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G02880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JWJFeggNOG:ENOG41104VIEMBL:FJ708778EnsemblPlants:AT5G16590EnsemblPlants:AT5G16590.1entrez:831521ExpressionAtlas:C0LGT4
Gene3D:3.80.10.10GeneID:831521GO:GO:0004672GO:GO:0005524GO:GO:0016021Gramene:AT5G16590.1hmmpanther:PTHR27008
hmmpanther:PTHR27008:SF34InterPro:IPR000719InterPro:IPR011009InterPro:IPR013210InterPro:IPR032675iPTMnet:C0LGT4KEGG:ath:AT5G16590
OMA:STPNRIDPaxDb:C0LGT4Pfam:PF00069Pfam:PF08263Pfam:Q9FMD7Pfscan:PS50011PhylomeDB:C0LGT4
PRIDE:C0LGT4PROSITE:PS50011ProteinModelPortal:C0LGT4RefSeq:NP_197162.1SMR:C0LGT4STRING:3702.AT5G16590.1SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT5G16590tair10-symbols:LRR1TMHMM:TMhelixUniGene:At.8850UniProt:C0LGT4UniProt:Q9FMD7
Coordinates (TAIR10) chr5:+:5431862..5433921
Molecular Weight (calculated) 67467.20 Da
IEP (calculated) 8.65
GRAVY (calculated) -0.03
Length 625 amino acids
Sequence (TAIR10)
(BLAST)
001: MKNKTNLGLS VFFFFICLVS VTSDLEADRR ALIALRDGVH GRPLLWNLTA PPCTWGGVQC ESGRVTALRL PGVGLSGPLP IAIGNLTKLE TLSFRFNALN
101: GPLPPDFANL TLLRYLYLQG NAFSGEIPSF LFTLPNIIRI NLAQNNFLGR IPDNVNSATR LATLYLQDNQ LTGPIPEIKI KLQQFNVSSN QLNGSIPDPL
201: SGMPKTAFLG NLLCGKPLDA CPVNGTGNGT VTPGGKGKSD KLSAGAIVGI VIGCFVLLLV LFLIVFCLCR KKKKEQVVQS RSIEAAPVPT SSAAVAKESN
301: GPPAVVANGA SENGVSKNPA AVSKDLTFFV KSFGEFDLDG LLKASAEVLG KGTFGSSYKA SFDHGLVVAV KRLRDVVVPE KEFREKLQVL GSISHANLVT
401: LIAYYFSRDE KLVVFEYMSR GSLSALLHGN KGSGRSPLNW ETRANIALGA ARAISYLHSR DATTSHGNIK SSNILLSESF EAKVSDYCLA PMISPTSTPN
501: RIDGYRAPEV TDARKISQKA DVYSFGVLIL ELLTGKSPTH QQLHEEGVDL PRWVSSITEQ QSPSDVFDPE LTRYQSDSNE NMIRLLNIGI SCTTQYPDSR
601: PTMPEVTRLI EEVSRSPASP GPLSD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)