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AT5G15830.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : basic leucine-zipper 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
basic leucine-zipper 3 (bZIP3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 42 (TAIR:AT3G30530.1); Has 1902 Blast hits to 1888 proteins in 142 species: Archae - 0; Bacteria - 8; Metazoa - 75; Fungi - 43; Plants - 1592; Viruses - 0; Other Eukaryotes - 184 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JVDKeggNOG:ENOG411060EEMBL:AK117828EMBL:AL391144EMBL:BT003683EMBL:CP002688EnsemblPlants:AT5G15830
EnsemblPlants:AT5G15830.1entrez:831440GeneID:831440GO:GO:0003700GO:GO:0043565Gramene:AT5G15830.1hmmpanther:PTHR22952
hmmpanther:PTHR22952:SF216HOGENOM:HOG000238858IntAct:Q9LFU3InterPro:IPR004827KEGG:ath:AT5G15830ncoils:CoilOMA:DDPRTHH
Pfam:PF00170Pfscan:PS50217PhylomeDB:Q9LFU3PIR:T51412PROSITE:PS00036PROSITE:PS50217Proteomes:UP000006548
RefSeq:NP_197087.1scanprosite:PS00036SMART:SM00338SMR:Q9LFU3STRING:3702.AT5G15830.1SUPFAM:SSF57959TAIR:AT5G15830
tair10-symbols:AtbZIP3tair10-symbols:bZIP3UniGene:At.31747UniProt:Q9LFU3
Coordinates (TAIR10) chr5:+:5168591..5169151
Molecular Weight (calculated) 21657.90 Da
IEP (calculated) 5.05
GRAVY (calculated) -1.13
Length 186 amino acids
Sequence (TAIR10)
(BLAST)
001: MQPNYDSSSL NNMQQQDYFN LNNYYNNLNP STNNNNLNIL QYPQIQELNL QSPVSNNSTT SDDATEEIFV INERKQRRMV SNRESARRSR MRKQRHLDEL
101: LSQVAWLRSE NHQLLDKLNQ VSDNNDLVIQ ENSSLKEENL ELRQVITSMK KLGGGIHDKY SSPSSMDELD QDFSSITDDP RTHHPS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)