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AT5G15720.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GDSL-motif lipase 7
Curator
Summary (TAIR10)
Contains lipase signature motif and GDSL domain.
Computational
Description (TAIR10)
GDSL-motif lipase 7 (GLIP7); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G15720-MONOMEREC:3.1.1.-eggNOG:ENOG410IJSGeggNOG:ENOG4110AT7EMBL:AL391144EMBL:AY084802EMBL:CP002688
EnsemblPlants:AT5G15720EnsemblPlants:AT5G15720.1entrez:831427Gene3D:3.40.50.1110GeneID:831427Genevisible:Q8LFJ9GO:GO:0005576
GO:GO:0016042GO:GO:0016298Gramene:AT5G15720.1hmmpanther:PTHR22835hmmpanther:PTHR22835:SF266HOGENOM:HOG000237649InParanoid:Q8LFJ9
InterPro:IPR001087InterPro:IPR013830KEGG:ath:AT5G15720OMA:YSGEDYAPaxDb:Q8LFJ9Pfam:PF00657Pfam:Q8LFJ9
PhylomeDB:Q8LFJ9PIR:T51401PRIDE:Q8LFJ9PRO:PR:Q8LFJ9ProteinModelPortal:Q8LFJ9Proteomes:UP000006548RefSeq:NP_568318.1
STRING:3702.AT5G15720.1SUPFAM:SSF52266TAIR:AT5G15720tair10-symbols:GLIP7UniGene:At.31762UniProt:Q8LFJ9
Coordinates (TAIR10) chr5:-:5124684..5126155
Molecular Weight (calculated) 40229.10 Da
IEP (calculated) 8.35
GRAVY (calculated) -0.04
Length 364 amino acids
Sequence (TAIR10)
(BLAST)
001: MKSLLICLVL LELVWLGNGQ SRDHQPLAPA FFVFGDSLVD SGNNNYIPTL ARANYFPYGI DFGFPTGRFC NGRTVVDYGA TYLGLPLVPP YLSPLSIGQN
101: ALRGVNYASA AAGILDETGR HYGARTTFNG QISQFEITIE LRLRRFFQNP ADLRKYLAKS IIGINIGSND YINNYLMPER YSTSQTYSGE DYADLLIKTL
201: SAQISRLYNL GARKMVLAGS GPLGCIPSQL SMVTGNNTSG CVTKINNMVS MFNSRLKDLA NTLNTTLPGS FFVYQNVFDL FHDMVVNPSR YGLVVSNEAC
301: CGNGRYGGAL TCLPLQQPCL DRNQYVFWDA FHPTETANKI IAHNTFSKSA NYSYPISVYE LAKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)