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AT5G15581.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.347
extracellular 0.318
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EMBL:AK118452EMBL:CP002688EnsemblPlants:AT5G15581EnsemblPlants:AT5G15581.1
entrez:6241099GeneID:6241099GO:GO:0016021Gramene:AT5G15581.1
KEGG:ath:AT5G15581Proteomes:UP000006548RefSeq:NP_001119229.1TAIR:AT5G15581
TMHMM:TMhelixUniGene:At.24634UniGene:At.67238UniProt:Q8GX40
Coordinates (TAIR10) chr5:+:5071829..5072140
Molecular Weight (calculated) 12295.70 Da
IEP (calculated) 12.77
GRAVY (calculated) -0.08
Length 103 amino acids
Sequence (TAIR10)
(BLAST)
001: MLPVKHLKDP IHTSNLFIQI WILIRQVIQK LRRHLLLLLL CLLNSGLRRL LTLKNFGTLR FFSLPILENL HSVISSVLCL RGSSRRRRRR DRRTKKNPAL
101: RQR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)