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AT5G15360.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.643
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AL353993EMBL:CP002688EnsemblPlants:AT5G15360EnsemblPlants:AT5G15360.1
entrez:831388GeneID:831388GO:GO:0016021Gramene:AT5G15360.1
KEGG:ath:AT5G15360PIR:T49971Proteomes:UP000006548RefSeq:NP_197040.1
TAIR:AT5G15360TMHMM:TMhelixUniGene:At.31812UniProt:Q9LXE7
Coordinates (TAIR10) chr5:-:4987437..4989182
Molecular Weight (calculated) 27729.70 Da
IEP (calculated) 6.33
GRAVY (calculated) 0.59
Length 253 amino acids
Sequence (TAIR10)
(BLAST)
001: MDLRMISWNF EVSLQLFLID SASPATGAPR CGRERAHVFL RSPASTCLGP IGEDGDCHLP GGLALPLDCS WTASELLSSL SFLWRAADLQ WLWLGGAYYA
101: LSDIGKLCSP LFCACFMSSL GFNLWLCRSL ALVFTGGLVQ FIVCLLVWLV VRAGFSDFCE SPFDHFIQLI SQAKGWSFKA SLDQRFGLPQ IACAFSNSSH
201: LQDMSHLFSA LASNSAVDLS ARAVVERTTY SLIIKLFAAL FSLSLLFLFP ATL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)