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AT5G14730.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.988
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01513.1); Has 85 Blast hits to 83 proteins in 14 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JU37eggNOG:ENOG4110792EMBL:AK228924EMBL:AL391149EMBL:BT010717EMBL:BT011788EMBL:CP002688
EnsemblPlants:AT5G14730EnsemblPlants:AT5G14730.1entrez:831325GeneID:831325Gramene:AT5G14730.1hmmpanther:PTHR33095hmmpanther:PTHR33095:SF4
HOGENOM:HOG000142253KEGG:ath:AT5G14730OMA:WSPIRSPPhylomeDB:Q9LER3PIR:T51418Proteomes:UP000006548RefSeq:NP_196977.1
STRING:3702.AT5G14730.1TAIR:AT5G14730UniGene:At.9940UniProt:Q9LER3
Coordinates (TAIR10) chr5:+:4756282..4757022
Molecular Weight (calculated) 27286.30 Da
IEP (calculated) 7.43
GRAVY (calculated) -0.69
Length 246 amino acids
Sequence (TAIR10)
(BLAST)
001: MSTMQDLSST VSFSPSFSFY ASGDLVETAV RVIRESESYY SVKVDGENDK EFEFETLPLG DESLFHFSTM TTTFKRSSDD DDVADDRVTS KNLFYGGWSV
101: DPPSLTSPSE SLSSSDSDDS ENISPSKFYC FWSPIRSPAR DDSLKSKGSS RRCRIKEFLR RSHSDGAVST VSATKRCSFK DLLRRSHSDG GGEGSSISTS
201: GNGSLVVKGR NKTAAYKPDV DKRRKSYLPY RQDLIGVFAG MGRFRN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)