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AT5G14450.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:22550958 (2012): plastid
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:16287169 (2006): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GDSL-like Lipase/Acylhydrolase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3217 Blast hits to 3179 proteins in 111 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 14; Plants - 3119; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G14450-MONOMEREC:3.1.1.-eggNOG:ENOG410IITDeggNOG:ENOG4111BJN
EMBL:AK118393EMBL:AL163817EMBL:BT005338EMBL:CP002688
EnsemblPlants:AT5G14450EnsemblPlants:AT5G14450.1entrez:831296Gene3D:3.40.50.1110
GeneID:831296Genevisible:Q9LY84GO:GO:0005576GO:GO:0009505
GO:GO:0009506GO:GO:0016042GO:GO:0016788Gramene:AT5G14450.1
hmmpanther:PTHR22835hmmpanther:PTHR22835:SF219HOGENOM:HOG000237648InParanoid:Q9LY84
InterPro:IPR001087InterPro:IPR013830KEGG:ath:AT5G14450ncoils:Coil
OMA:KVCCGYHPaxDb:Q9LY84Pfam:PF00657Pfam:Q9LY84
PhylomeDB:Q9LY84PIR:T48618PRIDE:Q9LY84PRO:PR:Q9LY84
ProteinModelPortal:Q9LY84Proteomes:UP000006548RefSeq:NP_196949.1STRING:3702.AT5G14450.1
SUPFAM:SSF52266TAIR:AT5G14450TMHMM:TMhelixUniGene:At.31932
UniGene:At.54843UniProt:Q9LY84
Coordinates (TAIR10) chr5:+:4658488..4660034
Molecular Weight (calculated) 43573.00 Da
IEP (calculated) 8.58
GRAVY (calculated) -0.29
Length 389 amino acids
Sequence (TAIR10)
(BLAST)
001: MKDNLERAKL MVSSTVFSWL LLCLFAVTTS VSVQPTCTFP AIYNFGDSNS DTGGISAAFE PIRDPYGQGF FHRPTGRDSD GRLTIDFIAE RLGLPYLSAY
101: LNSLGSNFRH GANFATGGST IRRQNETIFQ YGISPFSLDM QIAQFDQFKA RSALLFTQIK SRYDREKLPR QEEFAKALYT FDIGQNDLSV GFRTMSVDQL
201: KATIPDIVNH LASAVRNIYQ QGGRTFWVHN TGPFGCLPVN MFYMGTPAPG YLDKSGCVKA QNEMAMEFNR KLKETVINLR KELTQAAITY VDVYTAKYEM
301: MSNPKKLGFA NPLKVCCGYH EKYDHIWCGN KGKVNNTEIY GGSCPNPVMA VSWDGVHYTE AANKHVADRT LNGLLTDPPV PITRACYRQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)