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AT5G14410.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.978
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J5EGeggNOG:ENOG410ZAVQEMBL:AK175398EMBL:AL163817
EMBL:AY084925EMBL:BT025496EMBL:CP002688EnsemblPlants:AT5G14410
EnsemblPlants:AT5G14410.1entrez:831292GeneID:831292Gramene:AT5G14410.1
hmmpanther:PTHR36795hmmpanther:PTHR36795:SF2HOGENOM:HOG000153169KEGG:ath:AT5G14410
OMA:ITNLPYKPhylomeDB:Q9LY88PIR:T48614Proteomes:UP000006548
RefSeq:NP_196945.1STRING:3702.AT5G14410.1TAIR:AT5G14410UniGene:At.31939
UniProt:Q9LY88
Coordinates (TAIR10) chr5:-:4646897..4647398
Molecular Weight (calculated) 15594.20 Da
IEP (calculated) 12.12
GRAVY (calculated) -0.58
Length 133 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSSPKITNL PYKRLSLEDD VFGETTRRRS SFYSYRFKRV VSLGGRRRIR VRVKIRRLRG FVRKKANRVK TGILKILKRL KESQSHFGDL FAGNYLFMQV
101: NPSSLNAKYV FDKSFQGQNG NFPSRLSLPR VLM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)