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AT5G14390.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.636
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G01690.1); Has 3850 Blast hits to 3837 proteins in 836 species: Archae - 3; Bacteria - 1334; Metazoa - 667; Fungi - 199; Plants - 290; Viruses - 6; Other Eukaryotes - 1351 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1073eggNOG:KOG1552EMBL:AL163817EMBL:AY065443EMBL:AY117301EMBL:CP002688EnsemblPlants:AT5G14390
EnsemblPlants:AT5G14390.1entrez:831290ESTHER:arath-At5g14390Gene3D:3.40.50.1820GeneID:831290GO:GO:0016787Gramene:AT5G14390.1
hmmpanther:PTHR12277hmmpanther:PTHR12277:SF42HOGENOM:HOG000007142IntAct:Q9LY90InterPro:IPR022742InterPro:IPR029058KEGG:ath:AT5G14390
MEROPS:S09.A27OMA:KLRITFEPfam:PF12146Pfam:PF12695PhylomeDB:Q9LY90PIR:T48612Proteomes:UP000006548
RefSeq:NP_196943.1STRING:3702.AT5G14390.1SUPFAM:SSF53474TAIR:AT5G14390UniGene:At.5174UniProt:Q9LY90
Coordinates (TAIR10) chr5:-:4637551..4639575
Molecular Weight (calculated) 42347.60 Da
IEP (calculated) 8.81
GRAVY (calculated) -0.64
Length 369 amino acids
Sequence (TAIR10)
(BLAST)
001: MGGVTSSVAA KFAFFPPSPS SYKLVYDELT GLLLMNPFPH RENVEILKLP TRRGTEIVAM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHHTY ADIEAAYKCL EETYGAKQED IILYGQSVGS GPTLDLAARL PQLRAAVLHS PILSGLRVMY PVKKTYWFDI FKNIDKIPLV
201: NCPVLVIHGT CDEVVDCSHG KQLWELSKEK YEPLWLEGGN HCDLEHYPEY IKHLKKFITT VERDLSSRAS TAQLEKQSSD LEMPRQSVDR REKPRQSVDK
301: REKEKPPKGP SKKSKLRITF EQHLDRTRRS VDFHEKARKS VDHHQHHQNH HQIERGRKSV DRLDRVRSE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)