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AT5G14240.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.501
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Thioredoxin superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); Has 1075 Blast hits to 1075 proteins in 388 species: Archae - 0; Bacteria - 2; Metazoa - 646; Fungi - 206; Plants - 103; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111H24eggNOG:KOG3170EMBL:AL163817EMBL:BT000966EMBL:CP002688EnsemblPlants:AT5G14240EnsemblPlants:AT5G14240.1
entrez:831274Gene3D:3.40.30.10GeneID:831274Gramene:AT5G14240.1hmmpanther:PTHR21148hmmpanther:PTHR21148:SF1IntAct:Q9LYA5
InterPro:IPR012336InterPro:IPR024253KEGG:ath:AT5G14240OMA:TSTQWDDPfam:PF02114PhylomeDB:Q9LYA5PIR:T48597
Proteomes:UP000006548RefSeq:NP_196928.1SMR:Q9LYA5STRING:3702.AT5G14240.1SUPFAM:SSF52833TAIR:AT5G14240UniGene:At.31959
UniGene:At.31961UniProt:Q9LYA5
Coordinates (TAIR10) chr5:-:4596223..4597568
Molecular Weight (calculated) 28750.40 Da
IEP (calculated) 4.47
GRAVY (calculated) -0.68
Length 256 amino acids
Sequence (TAIR10)
(BLAST)
001: MADYHFVYKD IEGASTQWDD IQRKLGNLPE KAPAFKPPAY TPAEDESSAP KDQAWFDKKT EEELEDLEDD KDLDDDRFLE EYRKKRLSEL REAAKVKRYG
101: TVTPISGSDF VREVTQASAE DWVVVCLYKD GVAECSLLLG CLDELGSRYP ATKFVKIIST DCIPNYPDCN LPTLLVYHHG AIKGTHVGLK SFGRRCTPES
201: VALLLCQSEP VLNDGKGGDD DSSREAVMAG VRRQFIERVV KDHEDKDNDD GGYNSD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)