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AT5G14020.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.941
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:14760709 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Endosomal targeting BRO1-like domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Endosomal targeting BRO1-like domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: vacuole; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G73390.3); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJ8ZeggNOG:ENOG410ZJN0EMBL:AK227913EMBL:CP002688EnsemblPlants:AT5G14020EnsemblPlants:AT5G14020.1entrez:831250
Gene3D:1.25.40.280GeneID:831250GO:GO:0005773Gramene:AT5G14020.1hmmpanther:PTHR23032hmmpanther:PTHR23032:SF2HOGENOM:HOG000005873
InterPro:IPR004328KEGG:ath:AT5G14020OMA:QAHYCLSPfam:PF03097Pfscan:PS51180PhylomeDB:Q0WSL5PROSITE:PS51180
Proteomes:UP000006548RefSeq:NP_196906.3SMART:SM01041TAIR:AT5G14020UniGene:At.31989UniProt:Q0WSL5
Coordinates (TAIR10) chr5:-:4523730..4525819
Molecular Weight (calculated) 44475.30 Da
IEP (calculated) 7.03
GRAVY (calculated) -0.01
Length 401 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCAQSTIAV VGRKNKKRII QESVVFVLQF RVPVQSDLQR QLKGVSPKTT INRLTCLRNQ IELVAEDTGG SAISELRTAL EEYLSLLSGL IKKSKDGMEG
101: CVELKWRTLG DGRRAEICCT NLWMEMLIVI HMMAALALTE ANSLMIPKDC YASGSGNGVR VVSTDCRRDA VDLLLKASGY LEFCVREILT QLPHDIKSKL
201: PDDMQESVLQ TLSIQALGQG TEIQLGLAVD SQKATLSVKR RIACEQVIYF TQAYHCLSSC EAVSHGCAKK LLRFIYWKFL EAKAAAYYYH GLVTDKGSEP
301: ACHLSAVCCF LAAAEILGES KKACLSFCLA PPVTRAPPMW GVMKHLSQKI PEVAFRKSQT YGYLLEEEEK AMQCLPELPD FQLSLRPDDF ELPEIEDVSS
401: S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)