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AT5G13750.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23524662 (2013): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : zinc induced facilitator-like 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
zinc induced facilitator-like 1 (ZIFL1); FUNCTIONS IN: tetracycline:hydrogen antiporter activity; INVOLVED IN: response to karrikin; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator 1 (TAIR:AT5G13740.1); Has 19294 Blast hits to 18859 proteins in 2587 species: Archae - 361; Bacteria - 14367; Metazoa - 620; Fungi - 2172; Plants - 389; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XSE0eggNOG:KOG2615EMBL:AB011484EMBL:AK221880EMBL:AK318697EMBL:AY039542EMBL:AY062867
EMBL:AY086758EMBL:AY102150EMBL:CP002688EnsemblPlants:AT5G13750EnsemblPlants:AT5G13750.1entrez:831220GeneID:831220
Genevisible:Q94BZ1GO:GO:0005886GO:GO:0009414GO:GO:0009630GO:GO:0009705GO:GO:0010540GO:GO:0016021
GO:GO:0022821GO:GO:0048364GO:GO:0071805GO:GO:0080167GO:GO:0090333hmmpanther:PTHR23504hmmpanther:PTHR23504:SF29
HOGENOM:HOG000242165InParanoid:Q94BZ1InterPro:IPR001958InterPro:IPR011701InterPro:IPR020846iPTMnet:Q94BZ1KEGG:ath:AT5G13750
OMA:YAMEIFRPaxDb:Q94BZ1Pfam:PF07690Pfam:Q94BZ1Pfscan:PS50850PhylomeDB:Q94BZ1PRIDE:Q94BZ1
PRINTS:PR01035PRO:PR:Q94BZ1PROSITE:PS50850ProteinModelPortal:Q94BZ1Proteomes:UP000006548RefSeq:NP_001031877.1RefSeq:NP_568290.3
RefSeq:NP_851036.1STRING:3702.AT5G13750.1SUPFAM:SSF103473TAIR:AT5G13750tair10-symbols:ZIFL1TMHMM:TMhelixUniGene:At.19822
UniProt:Q94BZ1
Coordinates (TAIR10) chr5:+:4438318..4441289
Molecular Weight (calculated) 52302.00 Da
IEP (calculated) 7.65
GRAVY (calculated) 0.52
Length 478 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEEYAECLL EKNFHEDCSG CKVDQMKRLR RGFPFWELFT VWIIVLCTAL PISSLFPFLY FMIDDFNIAK KEEDIGFYAG FVGCSFMLGR AFTSVAWGLV
101: ADRYGRKPVI LIGTASVVVF NTLFGLSLNF WMAIITRFCL GSFNGLLGPI KAYAMEIFRD EYQGLALSAV STAWGIGLII GPAIGGFLAQ PAKQYPSLFS
201: QDSIFGKFPF FLPCLAISVF AFLVTIVSSR IPETLHNHKF NDDESYDALK DLSDDPESNK VAERNGKSSL LNNWPLISSI IVYCVFSLHD MAYTEIFSLW
301: ANSPRKYGGL GYSTADVGSV LAFSGFGLLI FQLSLYSYAE RLLGPIIVTR ISGSLAMVVL SCYPLIAKLS GLALTVTVTS ASVAKSVLGT SAITGLFILQ
401: NKAVRQDQRG AANGIAMTAM SLFKAIGPAA AGIIFSWSEK RQGAAFLPGT QMVFFILNVV LALGVVLTFK PFLAETQQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)