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AT5G13700.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.933
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : polyamine oxidase 1
Curator
Summary (TAIR10)
Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants).
Computational
Description (TAIR10)
polyamine oxidase 1 (PAO1); FUNCTIONS IN: FAD binding, polyamine oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 4 (TAIR:AT1G65840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G13700-MONOMERBioCyc:MetaCyc:AT5G13700-MONOMERBioGrid:16493BRENDA:1.5.3.16
EC:1.5.3.16eggNOG:ENOG410XSNCeggNOG:KOG0029EMBL:AB006704
EMBL:AK118627EMBL:BT026370EMBL:CP002688EnsemblPlants:AT5G13700
EnsemblPlants:AT5G13700.1entrez:831215Gene3D:3.40.50.720GeneID:831215
Genevisible:Q9FNA2GO:GO:0006598GO:GO:0046208GO:GO:0046592
GO:GO:0050660GO:GO:0052894GO:GO:0052895GO:GO:0052901
Gramene:AT5G13700.1gramene_pathway:1.5.3.16gramene_pathway:PWY-6441hmmpanther:PTHR10742
hmmpanther:PTHR10742:SF273HOGENOM:HOG000174927InParanoid:Q9FNA2InterPro:IPR001613
InterPro:IPR002937InterPro:IPR016040InterPro:IPR023753KEGG:ath:AT5G13700
KO:K13366ncoils:CoilOMA:ETCERTKPaxDb:Q9FNA2
Pfam:PF01593Pfam:Q9FNA2PhylomeDB:Q9FNA2PRIDE:Q9FNA2
PRINTS:PR00757PRO:PR:Q9FNA2ProteinModelPortal:Q9FNA2Proteomes:UP000006548
RefSeq:NP_196874.1SMR:Q9FNA2STRING:3702.AT5G13700.1SUPFAM:SSF51905
SUPFAM:SSF54373TAIR:AT5G13700tair10-symbols:APAOtair10-symbols:ATPAO1
tair10-symbols:PAO1UniGene:At.49017UniGene:At.6477UniPathway:UPA00211
UniProt:Q9FNA2
Coordinates (TAIR10) chr5:-:4420222..4422974
Molecular Weight (calculated) 52869.00 Da
IEP (calculated) 5.11
GRAVY (calculated) -0.15
Length 472 amino acids
Sequence (TAIR10)
(BLAST)
001: MSTASVIIIG AGISGISAAK VLVENGVEDV LILEATDRIG GRIHKQNFGD VPVELGAGWI AGVGGKESNP VWELASRFNL RTCFSDYTNA RFNIYDRSGK
101: IFPTGIASDS YKKAVDSAIL KLKSLEAQCS GQVAEEAPSS PKTPIELAID FILHDFEMAE VEPISTYVDF GEREFLVADE RGYECLLYKM AEEFLVTSHG
201: NILDYRLKLN QVVREVQQSR NGVVVKTEDG SVYEANYVIV SASIGVLQSD LLSFQPLLPR WKTEAIQKCD VMVYTKIFLK FPQCFWPCGP GQEFFIYAHE
301: QRGYFTFWQH MENAYPGSNI LVVTLTNEQS KRVEAQSDQE TMKEAMSVLR DMFGATIPYA TDILVPRWWN NRFQRGSYSN YPMISDNQLL QNIKAPVGRI
401: FFTGEHTSEK FSGYVHGGYL AGIDTSKSLL EEMKQSLLLQ PLLAFTESLT LTHQKPNNSQ IYTNVKFISG TS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)