AT5G13630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:4387567..4392082 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 153582.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.94 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1381 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MASLVYSPFT LSTSKAEHLS SLTNSTKHSF LRKKHRSTKP AKSFFKVKSA VSGNGLFTQT NPEVRRIVPI KRDNVPTVKI VYVVLEAQYQ SSLSEAVQSL 0101: NKTSRFASYE VVGYLVEELR DKNTYNNFCE DLKDANIFIG SLIFVEELAI KVKDAVEKER DRMDAVLVFP SMPEVMRLNK LGSFSMSQLG QSKSPFFQLF 0201: KRKKQGSAGF ADSMLKLVRT LPKVLKYLPS DKAQDARLYI LSLQFWLGGS PDNLQNFVKM ISGSYVPALK GVKIEYSDPV LFLDTGIWHP LAPTMYDDVK 0301: EYWNWYDTRR DTNDSLKRKD ATVVGLVLQR SHIVTGDDSH YVAVIMELEA RGAKVVPIFA GGLDFSGPVE KYFVDPVSKQ PIVNSAVSLT GFALVGGPAR 0401: QDHPRAIEAL KKLDVPYLVA VPLVFQTTEE WLNSTLGLHP IQVALQVALP ELDGAMEPIV FAGRDPRTGK SHALHKRVEQ LCIRAIRWGE LKRKTKAEKK 0501: LAITVFSFPP DKGNVGTAAY LNVFASIFSV LRDLKRDGYN VEGLPENAET LIEEIIHDKE AQFSSPNLNV AYKMGVREYQ DLTPYANALE ENWGKPPGNL 0601: NSDGENLLVY GKAYGNVFIG VQPTFGYEGD PMRLLFSKSA SPHHGFAAYY SYVEKIFKAD AVLHFGTHGS LEFMPGKQVG MSDACFPDSL IGNIPNVYYY 0701: AANNPSEATI AKRRSYANTI SYLTPPAENA GLYKGLKQLS ELISSYQSLK DTGRGPQIVS SIISTAKQCN LDKDVDLPDE GLELSPKDRD SVVGKVYSKI 0801: MEIESRLLPC GLHVIGEPPS AMEAVATLVN IAALDRPEDE ISALPSILAE CVGREIEDVY RGSDKGILSD VELLKEITDA SRGAVSAFVE KTTNSKGQVV 0901: DVSDKLTSLL GFGINEPWVE YLSNTKFYRA NRDKLRTVFG FLGECLKLVV MDNELGSLMQ ALEGKYVEPG PGGDPIRNPK VLPTGKNIHA LDPQAIPTTA 1001: AMASAKIVVE RLVERQKLEN EGKYPETIAL VLWGTDNIKT YGESLGQVLW MIGVRPIADT FGRVNRVEPV SLEELGRPRI DVVVNCSGVF RDLFINQMNL 1101: LDRAIKMVAE LDEPVEQNFV RKHALEQAEA LGIDIREAAT RVFSNASGSY SANISLAVEN SSWNDEKQLQ DMYLSRKSFA FDSDAPGAGM AEKKQVFEMA 1201: LSTAEVTFQN LDSSEISLTD VSHYFDSDPT NLVQSLRKDK KKPSSYIADT TTANAQVRTL SETVRLDART KLLNPKWYEG MMSSGYEGVR EIEKRLSNTV 1301: GWSATSGQVD NWVYEEANST FIQDEEMLNR LMNTNPNSFR KMLQTFLEAN GRGYWDTSAE NIEKLKELYS QVEDKIEGID R |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)