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AT5G13160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase.
Computational
Description (TAIR10)
avrPphB susceptible 1 (PBS1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, kinase activity; INVOLVED IN: defense response to bacterium, incompatible interaction, protein amino acid autophosphorylation, N-terminal protein myristoylation, defense response; LOCATED IN: microsome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G13160-MONOMERBioGrid:16433DIP:DIP-53310NEC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AF314176
EMBL:AF372927EMBL:AL391711EMBL:AY078037EMBL:CP002688EMBL:EF470759EnsemblPlants:AT5G13160EnsemblPlants:AT5G13160.1
entrez:831155ExpressionAtlas:Q9FE20Gene3D:2.60.120.200GeneID:831155Genevisible:Q9FE20GO:GO:0002221GO:GO:0004672
GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0006952GO:GO:0009816GO:GO:0042742GO:GO:0045087
GO:GO:0046777Gramene:AT5G13160.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF96HOGENOM:HOG000116550InParanoid:Q9FE20IntAct:Q9FE20
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441iPTMnet:Q9FE20KEGG:ath:AT5G13160
KO:K13430OMA:WNDDRRSPaxDb:Q9FE20Pfam:PF00069Pfam:Q9FE20Pfscan:PS50011PhylomeDB:Q9FE20
PMAP-CutDB:Q9FE20PRIDE:Q9FE20PRO:PR:Q9FE20PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9FE20
Proteomes:UP000006548Reactome:R-ATH-450302Reactome:R-ATH-450321RefSeq:NP_196820.1scanprosite:PS00107scanprosite:PS00108SMR:Q9FE20
STRING:3702.AT5G13160.1SUPFAM:SSF56112SwissPalm:Q9FE20TAIR:AT5G13160tair10-symbols:PBS1UniGene:At.23518UniProt:B2BDM5
UniProt:Q9FE20
Coordinates (TAIR10) chr5:+:4176854..4179682
Molecular Weight (calculated) 50386.60 Da
IEP (calculated) 6.91
GRAVY (calculated) -0.54
Length 456 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCFSCFDSS DDEKLNPVDE SNHGQKKQSQ PTVSNNISGL PSGGEKLSSK TNGGSKRELL LPRDGLGQIA AHTFAFRELA AATMNFHPDT FLGEGGFGRV
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)