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AT5G13130.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.980
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EC:3.6.-.-eggNOG:NOG252733EMBL:AL391711EMBL:CP002688EnsemblPlants:AT5G13130EnsemblPlants:AT5G13130.1EnsemblPlants:AT5G13130.2
entrez:831152ExpressionAtlas:F4K2G3Gene3D:3.30.565.10GeneID:831152GO:GO:0003677GO:GO:0003723GO:GO:0004519
GO:GO:0005524GO:GO:0005634GO:GO:0006281GO:GO:0006282GO:GO:0016301GO:GO:0016568GO:GO:0016887
GO:GO:0031047GO:GO:0031935GO:GO:0090305hmmpanther:PTHR23336hmmpanther:PTHR23336:SF7HOGENOM:HOG000243790InParanoid:F4K2G3
InterPro:IPR003594KEGG:ath:AT5G13130ncoils:CoilOMA:SRCHEIGPfam:PF13589PRIDE:F4K2G3ProteinModelPortal:F4K2G3
Proteomes:UP000006548RefSeq:NP_001190300.1RefSeq:NP_196817.2STRING:3702.AT5G13130.1SUPFAM:SSF55874TAIR:AT5G13130UniGene:At.32107
UniGene:At.54831UniProt:F4K2G3
Coordinates (TAIR10) chr5:+:4166755..4170324
Molecular Weight (calculated) 80923.50 Da
IEP (calculated) 8.40
GRAVY (calculated) -0.74
Length 708 amino acids
Sequence (TAIR10)
(BLAST)
001: MAESGSTNPK SPSVVPDSTL GGLKRDLRNY HDGDDSNNLS IKKSKTTKME NNCREIVPLD VTPLSIVPPD TPKLSRQFWK AGDDDEAAPV PLYCSNDAAV
101: RVHPQFLHAN ATSHKWALGA LAELLDNSLD EVSNGATYVH VDSTINKRDG KSSILIVEDN GGGMNPSTFR ECLSLGYSRK RNMANRVGQY GNGFKTSTMR
201: LGADAIVFSR SRGINGNNPT QSIGMLSYTF LYETRKCEAI VPTVDYELVD NKWKEIVYNS TNEWLDNLET ILRWSPYLSQ QDLLDQFNHL EEQGTRIVIY
301: NLWEDDEGKM ELDFDTDPHD IQLRGVNRDE KNIDMAKTYP NSRHFLTYRH SLRSYASILY LKRPDNFRII LRGEDVEHHS VLDDMMKIEE KTYKPMRSPE
401: WPDQEEMVAS LKLGFVKDAH HHIDIQGFNV YHKNRLIKPF WRVWNAAGSD GRGVIGILEA NFIQPAHNKQ GFERTVVLAK LESRLVTHQK NYWSSRCHEI
501: GYAPRRKQKN YESSVTETPR PFNNINVVKG SSSSTPVPVR VFRPNVEPSG RNQIPQVETR ERSFDINPEI GAKNRSYYGL GISSFKETGS VNLEAELQKV
601: KQESAKLVSE LQRQKQLLEL QLQESKAKIQ NLEKAQREKE VLELQLKESK ARIQNLENRQ EGVSTIFQQE RARRDVTEDG LRKKLREASD VIDGLRKQVD
701: TFKGKRIL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)