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AT5G13110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glucose-6-phosphate dehydrogenase 2
Curator
Summary (TAIR10)
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.
Computational
Description (TAIR10)
glucose-6-phosphate dehydrogenase 2 (G6PD2); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 3 (TAIR:AT1G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:16428BRENDA:1.1.1.49EC:1.1.1.49eggNOG:COG0364
eggNOG:KOG0563EMBL:AL391711EMBL:AY065042EMBL:CP002688
EMBL:X84229EnsemblPlants:AT5G13110EnsemblPlants:AT5G13110.1entrez:831150
Gene3D:3.40.50.720GeneID:831150Genevisible:Q9FY99GO:GO:0004345
GO:GO:0006006GO:GO:0009051GO:GO:0009507GO:GO:0009570
GO:GO:0050661Gramene:AT5G13110.1gramene_pathway:1.1.1.49gramene_pathway:OXIDATIVEPENT-PWY
HAMAP:MF_00966hmmpanther:PTHR23429hmmpanther:PTHR23429:SF3HOGENOM:HOG000046192
InParanoid:Q9FY99IntAct:Q9FY99InterPro:IPR001282InterPro:IPR016040
InterPro:IPR019796InterPro:IPR022674InterPro:IPR022675KEGG:00030+1.1.1.49
KEGG:00480+1.1.1.49KEGG:ath:AT5G13110KO:K00036OMA:SCMRCPA
PANTHER:PTHR23429PaxDb:Q9FY99Pfam:PF00479Pfam:PF02781
Pfam:Q9FY99PhylomeDB:Q9FY99PIR:S71245PRIDE:Q9FY99
PRINTS:PR00079PRO:PR:Q9FY99PROSITE:PS00069ProteinModelPortal:Q9FY99
Proteomes:UP000006548RefSeq:NP_196815.2scanprosite:PS00069SMR:Q9FY99
STRING:3702.AT5G13110.1SUPFAM:SSF51735SUPFAM:SSF55347TAIR:AT5G13110
tair10-symbols:G6PD2TIGRfam:TIGR00871TIGRFAMs:TIGR00871UniGene:At.61
UniPathway:UPA00115UniProt:Q9FY99
Coordinates (TAIR10) chr5:+:4158952..4161640
Molecular Weight (calculated) 67164.00 Da
IEP (calculated) 8.48
GRAVY (calculated) -0.36
Length 596 amino acids
Sequence (TAIR10)
(BLAST)
001: MAALSSSVTT RSYHSGYLAS FSPVNGDRHR SLSFLSASPQ GLNPLDLCVR FQRKSGRASV FMQDGAIVTN SNSSESKTSL KGLKDEVLSA LSQEAAKVGV
101: ESDGQSQSTV SITVVGASGD LAKKKIFPAL FALYYEGCLP EHFTIFGYSR SKMTDVELRN MVSKTLTCRI DKRANCGEKM EEFLKRCFYH SGQYDSQEHF
201: TELDKKLKEH EAGRISNRLF YLSIPPNIFV DAVKCASTSA SSVNGWTRVI VEKPFGRDSE TSAALTKSLK QYLEEDQIFR IDHYLGKELV ENLSVLRFSN
301: LIFEPLWSRQ YIRNVQFIFS EDFGTEGRGG YFDNYGIIRD IMQNHLLQIL ALFAMETPVS LDAEDIRNEK VKVLRSMRPI RVEDVVIGQY KSHTKGGVTY
401: PAYTDDKTVP KGSLTPTFAA AALFIDNARW DGVPFLMKAG KALHTRSAEI RVQFRHVPGN LYNRNTGSDL DQATNELVIR VQPDEAIYLK INNKVPGLGM
501: RLDRSNLNLL YSARYSKEIP DAYERLLLDA IEGERRLFIR SDELDAAWSL FTPLLKEIEE KKRIPEYYPY GSRGPVGAHY LAAKHKVQWG DVSIDQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)