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AT5G13080.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : WRKY DNA-binding protein 75
Curator
Summary (TAIR10)
WRKY75 is one of several transcription factors induced during Pi deprivation. It is nuclear localized and regulated differentially during Pi starvation. RNAi mediated suppression of WRKY75 made the plants more susceptible to Pi stress as indicated by the higher accumulation of anthocyanin during Pi starvation.
Computational
Description (TAIR10)
WRKY DNA-binding protein 75 (WRKY75); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 45 (TAIR:AT3G01970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:16425eggNOG:ENOG410IZ9TeggNOG:ENOG410YM5MEMBL:AF452174EMBL:AL391711EMBL:BT002426EMBL:BT006530
EMBL:CP002688EnsemblPlants:AT5G13080EnsemblPlants:AT5G13080.1entrez:831147Gene3D:2.20.25.80GeneID:831147Genevisible:Q9FYA2
GO:GO:0000122GO:GO:0001046GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0010055GO:GO:0032107
GO:GO:0043620GO:GO:0044212GO:GO:0048527Gramene:AT5G13080.1hmmpanther:PTHR31221hmmpanther:PTHR31221:SF33HOGENOM:HOG000237589
InParanoid:Q9FYA2IntAct:Q9FYA2InterPro:IPR003657KEGG:ath:AT5G13080OMA:HSKPELHPaxDb:Q9FYA2Pfam:PF03106
Pfam:Q9FYA2Pfscan:PS50811PhylomeDB:Q9FYA2PRIDE:Q9FYA2PRO:PR:Q9FYA2PROSITE:PS50811ProteinModelPortal:Q9FYA2
Proteomes:UP000006548RefSeq:NP_196812.1SMART:SM00774SMR:Q9FYA2STRING:3702.AT5G13080.1SUPFAM:0050605SUPFAM:SSF118290
TAIR:AT5G13080tair10-symbols:ATWRKY75tair10-symbols:WRKY75UniGene:At.28323UniProt:Q9FYA2
Coordinates (TAIR10) chr5:-:4149928..4151019
Molecular Weight (calculated) 16802.70 Da
IEP (calculated) 9.59
GRAVY (calculated) -1.02
Length 145 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGYDNGSLY APFLSLKSHS KPELHQGEEE SSKVRSEGCS KSVESSKKKG KKQRYAFQTR SQVDILDDGY RWRKYGQKAV KNNKFPRSYY RCTYGGCNVK
101: KQVQRLTVDQ EVVVTTYEGV HSHPIEKSTE NFEHILTQMQ IYSSF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)