AT5G11940.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Subtilase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, synergid; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT4G10540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:3849283..3852417 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 82931.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.60 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 762 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMSSIVSWWF FWVISAVCIL KVEFNIVEGG AYEETKVHIV YLGEKEHNDP ELVTSSHLRM LESLLGSKKD ASESIVHSYR NGFSGFAAHL TDSQAEQISE 101: HPDVVQVTPN TFYELQTTRT FDYLGLSHST PKGLLHEAKM GEDIIIGVLD SGVWPESQSF NDKGLGPIPK RWKGMCVDGE DFDSKKHCNK KLIGARYYMD 201: SLFRRNKTDS GIPDTEYMSA RESLPHGTHV ASTAGGSFVS NVSDNGFGVG TIRGGAPRAR IAVYKVCWQR VDRTCASADI IKAMDDAIAD GVDLITISIG 301: RPNPVLTEVD VYNQISYGAF HAVAKGIPVL SAGGNFGPGA YTVQNIAPWI ITVAATTLDR WYPTPLTLGN NVTLMARTPY KGNEIQGDLM FVYSPDEMTS 401: AAKGKVVLTF TTGSEESQAG YVTKLFQVEA KSVIIAAKRN DVIKVSEGLP IIMVDYEHGS TIWKYLSITR MPTIKISSAI ALNGRLVATK VADFSGRGPN 501: SISPYVLKPD VAAPGVAIVA ASTPESMGTE EGFAIQSGTS MSTPVVAGLV ALLRAVHPDW SPAALKSALI TTASTTDPYG EPIFSEGMTR KLADPFDFGG 601: GLVNPNKAAD PGLVYDISAE DYRLFLCASH YDEKQITKIS KTHTPYRCPS PKPSMLDLNL PSITIPFLKE DVTLTRTVTN VGPVDSVYKL IVEPPLGVKI 701: SVTPNTLLFN SNVKILSYKV TVSTTHKSNS IYYFGSLTWT DGSHKVTIPL SVRTQMLMYF DQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)