AT5G11800.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.462 plasma membrane 0.422 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : K+ efflux antiporter 6 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Putative potassium proton antiporter family | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
K+ efflux antiporter 6 (KEA6); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 4 (TAIR:AT2G19600.1); Has 10410 Blast hits to 10399 proteins in 2159 species: Archae - 365; Bacteria - 8460; Metazoa - 71; Fungi - 71; Plants - 421; Viruses - 0; Other Eukaryotes - 1022 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:3803635..3808069 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64395.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.48 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.60 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 597 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVEGRRRRRF SLSSQQLALL LLLLSFFLCF SVASPRAISD SDLLDETVAN SSSSVASLNA SSSSSLVKPK EGSFADIIDR ALEKEFNESD QNEVADPGSF 101: NNSVAGQQAV LETVARVKST KKNETKEEKR FQLHDVFNLN NDNRAEDTPT LIDRKDNVFI ISNSKSKYPV LQLDLRLISD LVVVIVSATC GGIAFACAGQ 201: PVITGYLLAG SIIGPGGLNF ISEMVQVETV AQFGVVFLLF ALGLEFSTAK LKVVRSVAVL GGLLQILLFM FLCGITVSLC GGKRSEGVFV GAFLSMSSTA 301: VVLKFLMEKN STNSLHGQVT IGILILQDCA VGLLFALLPV LEGNSGIVHG MLSIGKVVVL LLSFLAVLSI LSRTCIPWLL KLMVSLSSQT NELYQLAAVA 401: FCLLVAWCSD KLGLSLELGS FAAGVMISTT DLAEHTLEQI EPIRNLFAAL FLASIGMLVN VHFLWTHVDI LLASVILVII IKTTIVTTVV KGFGYNNKTA 501: LLVGISLAQI GEFAFVLLSR ASNLHLIEGK LYLLLLGTTA LSLVTTPLVF KMIPAVVHLG ILLKWFSPDS TIEKGEIVRS ESGKQRMILM SRQSHSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)