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AT5G11710.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 0.500
vacuole 0.500
ASURE: golgi,vacuole
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ENTH/VHS family protein
Curator
Summary (TAIR10)
EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues.
Computational
Description (TAIR10)
ENTH/VHS family protein; FUNCTIONS IN: binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: thylakoid, actin filament, Golgi apparatus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT2G43160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:16321eggNOG:ENOG410XSM0eggNOG:KOG2056EMBL:AK227905EMBL:AK230200EMBL:AL163814EMBL:AY074304
EMBL:AY096605EMBL:CP002688EnsemblPlants:AT5G11710EnsemblPlants:AT5G11710.1entrez:831043Gene3D:1.25.40.90GeneID:831043
Genevisible:Q8VY07GO:GO:0002020GO:GO:0005770GO:GO:0005794GO:GO:0005884GO:GO:0006623GO:GO:0009579
GO:GO:0030136GO:GO:0030276Gramene:AT5G11710.1hmmpanther:PTHR12276hmmpanther:PTHR12276:SF7HOGENOM:HOG000238255InParanoid:Q8VY07
IntAct:Q8VY07InterPro:IPR008942InterPro:IPR013809iPTMnet:Q8VY07KEGG:ath:AT5G11710KO:K12471OMA:MMGGMQQ
PaxDb:Q8VY07Pfam:PF01417Pfam:Q8VY07Pfscan:PS50942PhylomeDB:Q8VY07PIR:T48530PRIDE:Q8VY07
PRO:PR:Q8VY07PROSITE:PS50942ProteinModelPortal:Q8VY07Proteomes:UP000006548RefSeq:NP_196732.2SMART:SM00273SMR:Q8VY07
STRING:3702.AT5G11710.1SUPFAM:SSF48464TAIR:AT5G11710UniGene:At.32218UniProt:Q8VY07
Coordinates (TAIR10) chr5:+:3772981..3776316
Molecular Weight (calculated) 60637.30 Da
IEP (calculated) 4.70
GRAVY (calculated) -0.64
Length 560 amino acids
Sequence (TAIR10)
(BLAST)
001: MDFMKVFDQT VREIKREVNL KVLKVPEMEQ KVLDATDNEP WGPHGTALAE IAQATKKFSE CQMVMSVLWT RLSETGKDWR YVYKALAVID YLISNGSERA
101: VDEIIEHTYQ ISSLTSFEYV EPNGKDVGIN VRKKAENIVA LLNNKEKISE IRDKAVANRN KYVGLSSTGI TYKSGSSASF GGSFQSGSSN FDSYKDRDSR
201: EDKNDYESFQ KSRRGVKTEE QSYTSKKSFS RYGSTDHDNL SSGKKSPDSA KHRSYVSAAP SNNDDDFDDF DPRGTSSNKP STGSANQVDL FGGDLIGDFL
301: DSGPTETSST NNNENFQEAD LFADAAFVSA SAQGAEFGSQ TQKQVDLFSA SEPSVTVSSA PPTVDLFASS ESVVSPEAKI SIPESMATPN IVDPFAAVPM
401: DNFDGSDPFG AFTSHSASVS TGPQAPSVHG SATNTTSPLS FADSKPQHLQ KKDPFQVKSG IWADSLSRGL IDLNITAPKK ASLADVGVVG DLSNEDGNKA
501: SAASYYSGWS MGAGSGLGKT GLYSTQQQQQ QQQQQQAPDI SDDFFSSLSN QRYQSGGFKQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)