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AT5G11650.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.761
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G73480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G11650-MONOMEReggNOG:COG2267eggNOG:KOG1455EMBL:AK229263
EMBL:AL163814EMBL:BT026426EMBL:CP002688EnsemblPlants:AT5G11650
EnsemblPlants:AT5G11650.1entrez:831037ESTHER:arath-At5g11650Gene3D:3.40.50.1820
GeneID:831037GO:GO:0016021GO:GO:0016787Gramene:AT5G11650.1
gramene_pathway:4.3.1.18gramene_pathway:PWY-6196hmmpanther:PTHR11614hmmpanther:PTHR11614:SF96
HOGENOM:HOG000003227IntAct:Q9LYG5InterPro:IPR022742InterPro:IPR029058
KEGG:ath:AT5G11650MEROPS:S33.A11OMA:WRRKMAWPfam:PF12146
PhylomeDB:Q9LYG5PIR:T48524Proteomes:UP000006548Reactome:R-ATH-1482883
Reactome:R-ATH-426048RefSeq:NP_196726.1SMR:Q9LYG5STRING:3702.AT5G11650.1
SUPFAM:SSF53474TAIR:AT5G11650TMHMM:TMhelixUniGene:At.32229
UniProt:Q9LYG5
Coordinates (TAIR10) chr5:+:3745069..3746816
Molecular Weight (calculated) 43275.30 Da
IEP (calculated) 8.73
GRAVY (calculated) -0.05
Length 390 amino acids
Sequence (TAIR10)
(BLAST)
001: MASTSAEMDQ LTSGASNRII FILRTLRKCL VFVLSLVLSL LLILRLRPRR RVSPLSSPED EAVPAPSRRW RRKMAWKLEE EDTARRRSLA EGVEMAGDGE
101: ISCSLFYGRR GNALFSRSWL PISGELRGIL IIIHGLNEHS GRYSQFAKQL NASNLGVYAM DWIGHGGSDG LHGYVPSLDY VVSDTEAFLE KIRSENPGVP
201: CFLFGHSTGG AVVLKAASSP SIEDMLAGIV LTSPALRVKP AHPIVGAIAP IFSLLAPRFQ FKGANKRGIP VSRDPEALLA KYSDPLVYTG PIRVRTGYEI
301: LRITAYLTRN FKSVTVPFFV LHGTEDKVTD PLASQDLYNQ APSVFKDIKL YDGFLHDLLF EPEREEVGRD IIDWMMNRLD DVNGSAASLW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)