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AT5G11500.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.835
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF814 (InterPro:IPR008532); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410Z5JKeggNOG:KOG3272EMBL:AL163815EMBL:AY142650EMBL:CP002688EnsemblPlants:AT5G11500EnsemblPlants:AT5G11500.1
entrez:831022ExpressionAtlas:Q9LYE1GeneID:831022Gramene:AT5G11500.1hmmpanther:PTHR13049IntAct:Q9LYE1InterPro:IPR008532
ncoils:CoilOMA:DVWFHVHPfam:PF05670PhylomeDB:Q9LYE1PIR:T48509Proteomes:UP000006548RefSeq:NP_196711.1
STRING:3702.AT5G11500.1TAIR:AT5G11500UniGene:At.22316UniGene:At.68086UniProt:Q9LYE1
Coordinates (TAIR10) chr5:+:3676747..3678946
Molecular Weight (calculated) 25100.80 Da
IEP (calculated) 8.42
GRAVY (calculated) -0.81
Length 215 amino acids
Sequence (TAIR10)
(BLAST)
001: MVFYFKARPD AGDYTIFMGL DKFENEELIK YGFPEDVWFH VDKMSSAHVY LRLHRGQSFD DISEGVLEDC AQLVKANSIQ GNKVNNVDVV YTPWSNLKKT
101: ASMDVGQVGF HNSKMVRTIR VEKRVNEIVN RLNKTKVERT PDLRAEREAV NAAERAERKQ HLREKKKREE IDRLEKERQS EMRSYKGLMV TDKMTSNKDI
201: ASSNKSLQEL EDDFM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)