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AT5G11450.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT5G11450-MONOMERBioGrid:16294eggNOG:ENOG410IMCCeggNOG:ENOG4111N2NEMBL:AL163815EMBL:AY072412EMBL:AY114705
EMBL:CP002688EnsemblPlants:AT5G11450EnsemblPlants:AT5G11450.1entrez:831016Gene3D:3.40.1000.10GeneID:831016Genevisible:P82715
GO:GO:0005509GO:GO:0009507GO:GO:0009535GO:GO:0009543GO:GO:0009579GO:GO:0009654GO:GO:0015979
GO:GO:0019898GO:GO:0031977Gramene:AT5G11450.1hmmpanther:PTHR31407hmmpanther:PTHR31407:SF7HOGENOM:HOG000012630InParanoid:P82715
IntAct:P82715InterPro:IPR002683InterPro:IPR016123KEGG:ath:AT5G11450OMA:HYVASTAPaxDb:P82715Pfam:P82715
Pfam:PF01789PhylomeDB:P82715PIR:T48504PRIDE:P82715PRO:PR:P82715ProteinModelPortal:P82715Proteomes:UP000006548
RefSeq:NP_196706.2SMR:P82715STRING:3702.AT5G11450.1SUPFAM:SSF55724TAIR:AT5G11450UniGene:At.23497UniProt:P82715
Coordinates (TAIR10) chr5:+:3654475..3656357
Molecular Weight (calculated) 33366.60 Da
IEP (calculated) 9.06
GRAVY (calculated) -0.43
Length 297 amino acids
Sequence (TAIR10)
(BLAST)
001: MALLCPSLPS PNSRLFRCRS SNISSKYHGA SKELMIARSG VSTRSISSEK GLSRRDLVLI GLSSPLSMFL PLSSPVTHAE EDVKMSGEEL KMGTMVDDIN
101: AYSYAYPLDY PSEKLVFKWV ESRKPERYSS AAPLSPDARL RIVSERVDLT DNLVISISIG PPNSRLTSKE KKTWSAKEVA DSVLSDKSAL RVTSSQRLEE
201: SSVLDAHASD IDGEPYWYYE YLVRKSPTKI AEASKLYRHY ISSTAERDGY LYTINASTLG KQWDKMGPVL ERAVGSFRLL PPTDSYVPPY KDPWRFW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)