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AT5G10920.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : L-Aspartase-like family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
L-Aspartase-like family protein; FUNCTIONS IN: argininosuccinate lyase activity, catalytic activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Argininosuccinate lyase (InterPro:IPR009049), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Delta crystallin (InterPro:IPR003031), Fumarate lyase (InterPro:IPR000362); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G10920-MONOMERBioGrid:16237EC:4.3.2.1eggNOG:COG0165eggNOG:KOG1316EMBL:AL365234EMBL:AY045898
EMBL:BT000891EMBL:CP002688EMBL:Z97558EnsemblPlants:AT5G10920EnsemblPlants:AT5G10920.1entrez:830959Gene3D:1.10.275.10
GeneID:830959Genevisible:Q9LEU8GO:GO:0004056GO:GO:0009507GO:GO:0009570GO:GO:0042450Gramene:AT5G10920.1
gramene_pathway:4.3.2.1gramene_pathway:ARGSYN-PWYgramene_pathway:ARGSYNBSUB-PWYgramene_pathway:PWY-4983gramene_pathway:PWY-4984gramene_plant_reactome:1119263gramene_plant_reactome:1119444
gramene_plant_reactome:6874101gramene_plant_reactome:6876156HAMAP:MF_00006hmmpanther:PTHR11444hmmpanther:PTHR11444:SF3HOGENOM:HOG000242744InParanoid:Q9LEU8
IntAct:Q9LEU8InterPro:IPR000362InterPro:IPR008948InterPro:IPR009049InterPro:IPR020557InterPro:IPR022761InterPro:IPR024083
InterPro:IPR029419KEGG:00220+4.3.2.1KEGG:00250+4.3.2.1KEGG:ath:AT5G10920KO:K01755OMA:GRGKMERPANTHER:PTHR11444
PANTHER:PTHR11444:SF3PaxDb:Q9LEU8Pfam:PF00206Pfam:PF14698Pfam:Q9LEU8PhylomeDB:Q9LEU8PIR:T50801
PRIDE:Q9LEU8PRINTS:PR00149PRO:PR:Q9LEU8ProMEX:Q9LEU8PROSITE:PS00163ProteinModelPortal:Q9LEU8Proteomes:UP000006548
Reactome:R-ATH-70635RefSeq:NP_196653.1scanprosite:PS00163SMR:Q9LEU8STRING:3702.AT5G10920.1SUPFAM:SSF48557TAIR:AT5G10920
TIGRfam:TIGR00838TIGRFAMs:TIGR00838UniGene:At.24301UniPathway:UPA00068UniProt:Q9LEU8
Coordinates (TAIR10) chr5:+:3441805..3443892
Molecular Weight (calculated) 57515.70 Da
IEP (calculated) 5.68
GRAVY (calculated) -0.24
Length 517 amino acids
Sequence (TAIR10)
(BLAST)
001: MGAIDLSFSQ SLLFSSSRSN LSSSTHRSVS FLPPGSKSRC LPPLRSMSHD DDTASKEVKL WGGRFEESVT EKVEKFTESI SFDKVLYKQD IMGSKAHASM
101: LAHQGLITDS DKDSILRGLD DIERQIEANK FEWRTDREDV HMNIEAALTD LIGEPAKKLH TARSRNDQVA TDFRLWCRDA IDTIIVKIRN LQRALVELAL
201: KNEALIVPGY THLQRAQPVL LPHVLLTFVE QLERDAGRYV DCRARLNFSP LGACALAGTG LPIDRFMTAN ALGFTEPMRN SIDAVSDRDF VLEFLYTNAN
301: TGIHLSRLGE EWVLWASEEF GFMTPSDSVS TGSSIMPQKK NPDPMELVRG KSARVIGDLV TVLTLCKGLP LAYNRDFQED KEPMFDSTKT IMGMIDVSAE
401: FAQNVTFNED RIKKSLPAGH LDATTLADYL VKKGMPFRSS HDIVGKLVGV CVSKGCELQN LSLEEMKKLS PVFEEDVFGF LGVENSVNKF SSYGSTGSNC
501: VAEQLGYWVN KLNITST
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)