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AT5G10520.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.500
nucleus 0.500
ASURE: cytosol,nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ROP binding protein kinases 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ROP binding protein kinases 1 (RBK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: defense response, incompatible interaction; LOCATED IN: cytosol, endomembrane system; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G65530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G10520-MONOMERBioGrid:16195EC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AL353995EMBL:AY056156
EMBL:AY150507EMBL:CP002688EnsemblPlants:AT5G10520EnsemblPlants:AT5G10520.1entrez:830917Gene3D:2.60.120.200GeneID:830917
Genevisible:Q8H1D6GO:GO:0004674GO:GO:0005524GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0009623
GO:GO:0009814GO:GO:0012505GO:GO:0016020GO:GO:0051020GO:GO:0071369Gramene:AT5G10520.1hmmpanther:PTHR27001
hmmpanther:PTHR27001:SF105HOGENOM:HOG000116550InParanoid:Q8H1D6IntAct:Q8H1D6InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441KEGG:ath:AT5G10520ncoils:CoilOMA:RQSIVAWPaxDb:Q8H1D6Pfam:PF00069
Pfam:Q8H1D6Pfscan:PS50011PhylomeDB:Q8H1D6PIR:T49987PRIDE:Q8H1D6PRO:PR:Q8H1D6PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q8H1D6Proteomes:UP000006548RefSeq:NP_568231.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q8H1D6STRING:3702.AT5G10520.1SUPFAM:SSF56112TAIR:AT5G10520tair10-symbols:RBK1UniGene:At.26371
UniProt:Q8H1D6
Coordinates (TAIR10) chr5:-:3320584..3322649
Molecular Weight (calculated) 52654.70 Da
IEP (calculated) 6.73
GRAVY (calculated) -0.39
Length 467 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVEDNKNSE SKNHQEVELH RNDLGLEDSS SPRGVLGMVS DSDNSSSSCS SCSSDDKSSS TSSPFSNTTK TVSSSHHGLQ WNKMIESIKK KSMRRFSVIP
101: LLASYELTRK NLRRKQPKLT PSESAFTCEA FFMAKPSWRN FTYEELAVAT DYFNPENMIG KGGHAEVYKG VLINGETVAI KKLMSHAKEE EERVSDFLSE
201: LGIIAHVNHP NAARLRGFSS DRGLHFVLEY APYGSLASML FGSEECLEWK IRYKVALGIA DGLSYLHNAC PRRIIHRDIK ASNILLNHDY EAQISDFGLA
301: KWLPENWPHH VVFPIEGTFG YLAPEYFMHG IVDEKIDVFA FGVLLLEIIT SRRAVDTASR QSIVAWAKPF LEKNSMEDIV DPRLGNMFNP TEMQRVMLTA
401: SMCVHHIAAM RPDMTRLVQL LRGEDGPAEL QQKAGERTMS VNACDLQDHT SSSYLNELRR HRQLLME
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)