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AT5G10290.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : leucine-rich repeat transmembrane protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G65240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G10290-MONOMERBioGrid:16171EC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IGBPEMBL:AL360334EMBL:AY093029
EMBL:CP002688EMBL:FJ708775EnsemblPlants:AT5G10290EnsemblPlants:AT5G10290.1entrez:830893Gene3D:2.60.120.200Gene3D:3.80.10.10
GeneID:830893Genevisible:C0LGT1GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0016021Gramene:AT5G10290.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF33HOGENOM:HOG000116554InParanoid:C0LGT1InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR017441InterPro:IPR032675iPTMnet:C0LGT1
KEGG:ath:AT5G10290OMA:EWQNVEVPaxDb:C0LGT1Pfam:C0LGT1Pfam:PF00069Pfam:PF00560Pfam:PF08263
Pfscan:PS50011Pfscan:PS51257PhylomeDB:C0LGT1PIR:T50817PRIDE:C0LGT1PRO:PR:C0LGT1PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:C0LGT1Proteomes:UP000006548RefSeq:NP_196591.2scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMART:SM00369SMR:C0LGT1STRING:3702.AT5G10290.1SUPFAM:SSF52058SUPFAM:SSF56112SwissPalm:C0LGT1
TAIR:AT5G10290TMHMM:TMhelixUniGene:At.6000UniProt:C0LGT1
Coordinates (TAIR10) chr5:-:3235462..3238171
Molecular Weight (calculated) 68662.60 Da
IEP (calculated) 6.13
GRAVY (calculated) -0.20
Length 613 amino acids
Sequence (TAIR10)
(BLAST)
001: MRMFSLQKMA MAFTLLFFAC LCSFVSPDAQ GDALFALRIS LRALPNQLSD WNQNQVNPCT WSQVICDDKN FVTSLTLSDM NFSGTLSSRV GILENLKTLT
101: LKGNGITGEI PEDFGNLTSL TSLDLEDNQL TGRIPSTIGN LKKLQFLTLS RNKLNGTIPE SLTGLPNLLN LLLDSNSLSG QIPQSLFEIP KYNFTSNNLN
201: CGGRQPHPCV SAVAHSGDSS KPKTGIIAGV VAGVTVVLFG ILLFLFCKDR HKGYRRDVFV DVAGEVDRRI AFGQLKRFAW RELQLATDNF SEKNVLGQGG
301: FGKVYKGVLP DNTKVAVKRL TDFESPGGDA AFQREVEMIS VAVHRNLLRL IGFCTTQTER LLVYPFMQNL SLAHRLREIK AGDPVLDWET RKRIALGAAR
401: GFEYLHEHCN PKIIHRDVKA ANVLLDEDFE AVVGDFGLAK LVDVRRTNVT TQVRGTMGHI APEYLSTGKS SERTDVFGYG IMLLELVTGQ RAIDFSRLEE
501: EDDVLLLDHV KKLEREKRLG AIVDKNLDGE YIKEEVEMMI QVALLCTQGS PEDRPVMSEV VRMLEGEGLA ERWEEWQNVE VTRRHEFERL QRRFDWGEDS
601: MHNQDAIELS GGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)