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AT5G10170.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : myo-inositol-1-phosphate synthase 3
Curator
Summary (TAIR10)
myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.
Computational
Description (TAIR10)
myo-inositol-1-phosphate synthase 3 (MIPS3); FUNCTIONS IN: binding, inositol-3-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, inositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myo-inositol-1-phosphate synthase (InterPro:IPR002587), Myo-inositol-1-phosphate synthase, GAPDH-like (InterPro:IPR013021), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: myo-inositol-1-phosphate synthase 2 (TAIR:AT2G22240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G10170-MONOMERBioGrid:16159BRENDA:5.5.1.4EC:5.5.1.4eggNOG:COG1260eggNOG:KOG0693EMBL:AL356332
EMBL:AY065415EMBL:AY096554EMBL:CP002688EnsemblPlants:AT5G10170EnsemblPlants:AT5G10170.1entrez:830881Gene3D:3.40.50.720
GeneID:830881Genevisible:Q9LX12GO:GO:0004512GO:GO:0005737GO:GO:0006021GO:GO:0008654GO:GO:0009793
Gramene:AT5G10170.1gramene_pathway:5.5.1.4gramene_pathway:PWY-2301gramene_pathway:PWY-4661gramene_plant_reactome:1119378gramene_plant_reactome:6875463hmmpanther:PTHR11510
hmmpanther:PTHR11510:SF6HOGENOM:HOG000013469InParanoid:Q9LX12InterPro:IPR002587InterPro:IPR013021InterPro:IPR016040KEGG:00521+5.5.1.4
KEGG:00562+5.5.1.4KEGG:ath:AT5G10170KO:K01858OMA:FMEHMVPPANTHER:PTHR11510PaxDb:Q9LX12Pfam:PF01658
Pfam:PF07994Pfam:Q9LX12PhylomeDB:Q9LX12PIR:T50021PIRSF:PIRSF015578PRIDE:Q9LX12PRO:PR:Q9LX12
ProteinModelPortal:Q9LX12Proteomes:UP000006548Reactome:R-ATH-1855183RefSeq:NP_196579.1SABIO-RK:Q9LX12SMR:Q9LX12STRING:3702.AT5G10170.1
SUPFAM:SSF51735SUPFAM:SSF55347TAIR:AT5G10170tair10-symbols:ATMIPS3tair10-symbols:MIPS3UniGene:At.1631UniGene:At.20673
UniPathway:UPA00823UniProt:Q9LX12
Coordinates (TAIR10) chr5:-:3187538..3190161
Molecular Weight (calculated) 56420.80 Da
IEP (calculated) 5.66
GRAVY (calculated) -0.17
Length 510 amino acids
Sequence (TAIR10)
(BLAST)
001: MFIESFKVES PNVKYTENEI HSVYDYQTTE LVHENKNGAF QWTVKPKTVK YEFKTDTHVP KLGVMLVGWG GNNGSTLTAG VIANREGISW ATKEKVQQAN
101: YFGSLTQASS IRVGSFNGEE IYAPFKSLLP MVNPEEIVFG GWDISDMNLA DAMARAKVLD IDLQKQMRPF MEHMVPLPGI FDPDFIAANQ GSRANHVIKG
201: TKKQQLEQVI KDIREFKEKN KVDKVVVLWT ANTERYSNVV VGLNDTTENL MSSLDKDEAE ISPSTLYAIA CVLENVPFIN GSPQNTFVPG LIELAIKRNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVGSN GILYEPGEHP DHVVVIKYVP CVGDSKRAMD
401: EYTSEIFMGG KNTIVMHNTC EDSLLAAPII LDLVLLAELT TRIQFMSENE GKFHSFHPVA TLLSYLSKAP LVPPGTPVVN ALSKQRAMLE NVLRACVGLA
501: PENNMILEYK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)