AT5G10020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich receptor-like protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G27060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:3133514..3136949 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 114721.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.77 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 1048 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MSHFLTFCFL SLLLLLHGAN AVTETELRSL LEFRKGIRDE TSHQRISWSD TSSLTDPSTC PNDWPGISCD PETGSIIAIN LDRRGLSGEL KFSTLSGLTR 0101: LRNLSLSGNS FSGRVVPSLG GISSLQHLDL SDNGFYGPIP GRISELWSLN HLNLSSNKFE GGFPSGFRNL QQLRSLDLHK NEIWGDVGEI FTELKNVEFV 0201: DLSCNRFNGG LSLPMENISS ISNTLRHLNL SHNALNGKFF SEESIGSFKN LEIVDLENNQ INGELPHFGS QPSLRILKLA RNELFGLVPQ ELLQSSIPLL 0301: ELDLSRNGFT GSISEINSST LTMLNLSSNG LSGDLPSSFK SCSVIDLSGN TFSGDVSVVQ KWEATPDVLD LSSNNLSGSL PNFTSAFSRL SVLSIRNNSV 0401: SGSLPSLWGD SQFSVIDLSS NKFSGFIPVS FFTFASLRSL NLSRNNLEGP IPFRGSRASE LLVLNSYPQM ELLDLSTNSL TGMLPGDIGT MEKIKVLNLA 0501: NNKLSGELPS DLNKLSGLLF LDLSNNTFKG QIPNKLPSQM VGFNVSYNDL SGIIPEDLRS YPPSSFYPGN SKLSLPGRIP ADSSGDLSLP GKKHHSKLSI 0601: RIAIIVASVG AAIMILFVLF AYHRTQLKDF HGRNRFTDQA TTRDTKFGRS SRPSLFNFSS NVEQQSSSLS FSNDHLLTAN SRSLSGIPGC EAEISEQGAP 0701: ATSAPTNLLD DYPAASGRKS SSGGSPLSSS PRFSDQPVML DVYSPDRLAG ELFFLDVSLK LTAEELSRAP AEVLGRSSHG TLYKATLDNG HMLTVKWLRV 0801: GLVRHKKDFA REAKKIGSLK HPNIVPLRAY YWGPREQERL LLSDYLRGES LAMHLYETTP RRYSPMSFSQ RLKVAVEVAQ CLLYLHDRAM PHGNLKPTNI 0901: ILSSPDNTVR ITDYCVHRLM TPSGVAEQIL NMSALGYSAP ELSSASKPIP TLKSDVYAFG VILMELLTRR SAGDIISGQT GAVDLTDWVR LCDQEGRRMD 1001: CIDRDIAGGE EFSKGMEDAL AVAIRCILSV NERPNIRQVL DHLTSISA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)