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AT5G09990.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.727
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : elicitor peptide 5 precursor
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
elicitor peptide 5 precursor (PROPEP5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSMSeggNOG:ENOG41108P6EMBL:AB016893EMBL:AK176126
EMBL:AY086181EMBL:BT024633EMBL:CP002688EnsemblPlants:AT5G09990
EnsemblPlants:AT5G09990.1entrez:830860GeneID:830860Genevisible:Q8LD63
GO:GO:0006952Gramene:AT5G09990.1HOGENOM:HOG000115497InParanoid:Q8LD63
KEGG:ath:AT5G09990OMA:RGGVNDYPaxDb:Q8LD63Pfam:Q8LD63
PRIDE:Q8LD63PRO:PR:Q8LD63Proteomes:UP000006548RefSeq:NP_568224.1
STRING:3702.AT5G09990.1TAIR:AT5G09990tair10-symbols:PROPEP5UniGene:At.32428
UniGene:At.32430UniProt:Q8LD63
Coordinates (TAIR10) chr5:+:3124623..3124976
Molecular Weight (calculated) 9944.92 Da
IEP (calculated) 10.71
GRAVY (calculated) -1.14
Length 86 amino acids
Sequence (TAIR10)
(BLAST)
1: MQQERDHKRD CCKLMPQTVK AFFKCLRFRR SSSSSSDMVK ARARNEEKEE PSSIETSTRS LNVMRKGIRK QPVSSGKRGG VNDYDM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)