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AT5G09970.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.962
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 78, subfamily A, polypeptide 7
Curator
Summary (TAIR10)
member of CYP78A
Computational
Description (TAIR10)
cytochrome P450, family 78, subfamily A, polypeptide 7 (CYP78A7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: regulation of meristem growth; EXPRESSED IN: embryo, leaf primordium, shoot lateral meristem, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G09970-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156EMBL:AB016893EMBL:AK227001EMBL:AY136401
EMBL:BT000225EMBL:CP002688EnsemblPlants:AT5G09970EnsemblPlants:AT5G09970.1entrez:830858Gene3D:1.10.630.10GeneID:830858
Genevisible:Q9FIB0GO:GO:0005506GO:GO:0007275GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0020037
GO:GO:0040008GO:GO:0044550Gramene:AT5G09970.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF66HOGENOM:HOG000218628InParanoid:Q9FIB0
InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT5G09970OMA:CEMEHPLPaxDb:Q9FIB0Pfam:PF00067
Pfam:Q9FIB0PhylomeDB:Q9FIB0PRIDE:Q9FIB0PRINTS:PR00385PRINTS:PR00463PRO:PR:Q9FIB0PROSITE:PS00086
ProteinModelPortal:Q9FIB0Proteomes:UP000006548RefSeq:NP_196559.1scanprosite:PS00086SMR:Q9FIB0STRING:3702.AT5G09970.1SUPFAM:SSF48264
TAIR:AT5G09970tair10-symbols:CYP78A7TMHMM:TMhelixUniGene:At.32431UniProt:Q9FIB0
Coordinates (TAIR10) chr5:+:3112241..3113987
Molecular Weight (calculated) 59497.00 Da
IEP (calculated) 6.69
GRAVY (calculated) -0.04
Length 536 amino acids
Sequence (TAIR10)
(BLAST)
001: MELMNLASKE TSYWMIALPA GFGSQNLHDV STLGYLFLAV VFLSIVTWAL AGGGGVAWKN GRNRLGRVAI PGPRGIPVFG SLFTLSRGLA HRTLAAMAWS
101: RANTEIMAFS LGSTPVIVAS EPNIAREILM SPHFADRPVK QSAKSLMFSR AIGFAPNGTY WRMLRRIAST HLFAPRRILA HEAGRQLDCA EMVKAVSVEQ
201: NGAGSVVLRK HLQLAALNNI MGSVFGRRYD PLAQKEDLDE LTSMVREGFE LLGAFNWSDY LPWLGYFYDS IRLNQRCSDL VPRIRTLVKK IIDEHRVSNS
301: EKKRDIGDFV DVLLSLDGDE KLQEDDMIAV LWEMIFRGTD TTALLTEWTM AELVLNPNVQ TKLRDEILTA VGDGADGDVA DADLAKLPYL NAVVKETLRL
401: HPPGPLLSWA RLSTSDVQLS NGMVIPKGTT AMVNMWAITH DQTVWSDPLK FDPERFTGNA DMDIRGGDLR LAPFGAGRRV CPGKNMGLAT VTRWVAELVR
501: RFEWGQDQTE PVDLGEVLKL SCEMEHPLRA VVTEIF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)