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AT5G09830.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.942
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : BolA-like family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BolA-like family protein; CONTAINS InterPro DOMAIN/s: BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: chloroplast sulfur E (TAIR:AT4G26500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0271eggNOG:KOG3348EMBL:AB016893EMBL:AK228169EMBL:AY087656EMBL:BT003151EMBL:CP002688
EnsemblPlants:AT5G09830EnsemblPlants:AT5G09830.1entrez:830843GeneID:830843Genevisible:Q9FIC3GO:GO:0005634GO:GO:0005737
GO:GO:0005829GO:GO:0006979GO:GO:0010039Gramene:AT5G09830.1hmmpanther:PTHR12735hmmpanther:PTHR12735:SF27HOGENOM:HOG000255170
IntAct:Q9FIC3InterPro:IPR002634KEGG:ath:AT5G09830ncoils:CoilOMA:EIAQMHAPaxDb:Q9FIC3PDB:2MM9
PDB:2MMAPDB:4PUHPDBsum:2MM9PDBsum:2MMAPDBsum:4PUHPfam:PF01722Pfam:Q9FIC3
PhylomeDB:Q9FIC3PIRSF:PIRSF003113PRIDE:Q9FIC3PRO:PR:Q9FIC3ProteinModelPortal:Q9FIC3Proteomes:UP000006548RefSeq:NP_568217.1
SMR:Q9FIC3STRING:3702.AT5G09830.1SUPFAM:SSF82657TAIR:AT5G09830UniGene:At.32450UniProt:Q9FIC3
Coordinates (TAIR10) chr5:-:3057816..3058769
Molecular Weight (calculated) 10375.40 Da
IEP (calculated) 5.66
GRAVY (calculated) -0.50
Length 93 amino acids
Sequence (TAIR10)
(BLAST)
1: MVTKEQVEAS LTSKLKPIHL EVIDISGGCG SSFEVEVVSE QFEGKRLLER HRMVNAALEE EMKEIHALSI KKAQTPQQWK PPSQDSATLT KDA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)