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AT5G09220.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.717
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : amino acid permease 2
Curator
Summary (TAIR10)
member of AAAP family
Computational
Description (TAIR10)
amino acid permease 2 (AAP2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 4 (TAIR:AT5G63850.1); Has 2701 Blast hits to 2684 proteins in 226 species: Archae - 0; Bacteria - 6; Metazoa - 573; Fungi - 420; Plants - 1375; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0814eggNOG:KOG1303EMBL:AL391712EMBL:AY084665EMBL:AY090341EMBL:CP002688EMBL:X71787
EnsemblPlants:AT5G09220EnsemblPlants:AT5G09220.1entrez:830781GeneID:830781Genevisible:Q38967GO:GO:0005887GO:GO:0015293
GO:GO:0015800GO:GO:0015804Gramene:AT5G09220.1hmmpanther:PTHR22950hmmpanther:PTHR22950:SF295HOGENOM:HOG000238530InParanoid:Q38967
InterPro:IPR013057iPTMnet:Q38967KEGG:ath:AT5G09220OMA:KRNGTMWPaxDb:Q38967Pfam:PF01490Pfam:Q38967
PhylomeDB:Q38967PIR:S52421PRIDE:Q38967PRO:PR:Q38967ProteinModelPortal:Q38967Proteomes:UP000006548RefSeq:NP_196484.1
SABIO-RK:Q38967STRING:3702.AT5G09220.1TAIR:AT5G09220tair10-symbols:AAP2TCDB:2.A.18.2.7TMHMM:TMhelixUniGene:At.23992
UniGene:At.72977UniProt:Q38967
Coordinates (TAIR10) chr5:+:2866867..2868863
Molecular Weight (calculated) 54150.30 Da
IEP (calculated) 9.16
GRAVY (calculated) 0.44
Length 493 amino acids
Sequence (TAIR10)
(BLAST)
001: MGETAAANNH RHHHHHGHQV FDVASHDFVP PQPAFKCFDD DGRLKRTGTV WTASAHIITA VIGSGVLSLA WAIAQLGWIA GPAVMLLFSL VTLYSSTLLS
101: DCYRTGDAVS GKRNYTYMDA VRSILGGFKF KICGLIQYLN LFGIAIGYTI AASISMMAIK RSNCFHKSGG KDPCHMSSNP YMIVFGVAEI LLSQVPDFDQ
201: IWWISIVAAV MSFTYSAIGL ALGIVQVAAN GVFKGSLTGI SIGTVTQTQK IWRTFQALGD IAFAYSYSVV LIEIQDTVRS PPAESKTMKK ATKISIAVTT
301: IFYMLCGSMG YAAFGDAAPG NLLTGFGFYN PFWLLDIANA AIVVHLVGAY QVFAQPIFAF IEKSVAERYP DNDFLSKEFE IRIPGFKSPY KVNVFRMVYR
401: SGFVVTTTVI SMLMPFFNDV VGILGALGFW PLTVYFPVEM YIKQRKVEKW STRWVCLQML SVACLVISVV AGVGSIAGVM LDLKVYKPFK STY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)