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AT5G08410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:20423899 (2010): plastid
  • PMID:18431481 (2008): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ferredoxin/thioredoxin reductase subunit A (variable subunit) 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 (FTRA2); FUNCTIONS IN: ferredoxin:thioredoxin reductase activity, catalytic activity, ferredoxin reductase activity; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin thioredoxin reductase, alpha chain (InterPro:IPR004207), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 (TAIR:AT5G23440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0320eggNOG:KOG2672EMBL:AK117319EMBL:AY087076EMBL:BT003708EMBL:CP002688EnsemblPlants:AT5G08410
EnsemblPlants:AT5G08410.1entrez:830739GeneID:830739GO:GO:0009107GO:GO:0009249GO:GO:0009507GO:GO:0015979
GO:GO:0016992GO:GO:0051539Gramene:AT5G08410.1hmmpanther:PTHR10949hmmpanther:PTHR10949:SF11HOGENOM:HOG000239293IntAct:Q8LBP6
InterPro:IPR003698InterPro:IPR004207InterPro:IPR008990KEGG:00785+2.8.1.8KEGG:ath:AT5G08410PANTHER:PTHR10949Pfam:PF02941
PhylomeDB:Q8LBP6ProDom:PD015034Proteomes:UP000006548RefSeq:NP_568195.1SMR:Q8LBP6STRING:3702.AT5G08410.1SUPFAM:SSF50090
TAIR:AT5G08410tair10-symbols:FTRA2UniGene:At.32583unipathway:UPA00538UniProt:Q8LBP6
Coordinates (TAIR10) chr5:-:2709974..2710528
Molecular Weight (calculated) 20147.20 Da
IEP (calculated) 9.37
GRAVY (calculated) -0.11
Length 184 amino acids
Sequence (TAIR10)
(BLAST)
001: MTNSYALSPA IIAAVRPPAS QDYLVAASLS GRKSINSSSS SIFVPISLST SYGRSKCAFS ISRKNPKSTI RCDIAVKSAA SVDADADLSS STSLETEEDE
101: KAKEKIGARV RVTVPLKVYH VVRVPEVELM GMEGFIKDYV VLWKGKKISA NLPFKVQFVK EIEGRGPVKF FTHLKEDEFE LIDP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)